Tag | Content |
---|
EnhancerAtlas ID | HS062-12039 |
Organism | Homo sapiens |
Tissue/cell | GM18486 |
Coordinate | chr4:2413340-2415670 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
REST | MA0138.2 | chr4:2413574-2413595 | AGTCCTCTCCTAGGTCCTGGG | - | 6.08 | TFAP2A | MA0003.3 | chr4:2413841-2413852 | TGCCTGAGGCG | - | 6.62 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_15001 | chr4:2412876-2419179 | CD4_Memory_Primary_7pool | SE_21246 | chr4:2413256-2417068 | CD8_Memory_7pool | SE_23273 | chr4:2412473-2416531 | Colon_Crypt_1 | SE_23907 | chr4:2413155-2416455 | Colon_Crypt_2 | SE_25006 | chr4:2413063-2416357 | Colon_Crypt_3 | SE_50887 | chr4:2412579-2416832 | Sigmoid_Colon | SE_53084 | chr4:2413063-2416819 | Small_Intestine |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 7 | Chromosome | Start | End |
chr4 | 2413816 | 2414000 | chr4 | 2413731 | 2413860 | chr4 | 2413516 | 2413695 | chr4 | 2413665 | 2413773 | chr4 | 2414438 | 2415225 | chr4 | 2413768 | 2414486 | chr4 | 2414575 | 2415364 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH04I002411 | chr4 | 2412736 | 2416827 |
|
Enhancer Sequence | GGGTCCCGCG GACAGGAGTG TAAATCCCAG CCCTGCTTCC TCCTGGCTGT AGAGGTTCGA 60 GCAAGGTGAC TTGTCTTGAG ACCCCATTTG TAAAACAGGG TGCATCAGCA TAGTTTAAAC 120 GTTCACAAAT GACCCTCACA CCTCAGTGCC TTAACGGATA GAAGCTCATC CCCTCACATC 180 ACAGTGCAGC ACAAGTGCAC CCCAGCCCCT TCCCCGCTGC CACCCGAGCC CTGGAGTCCT 240 CTCCTAGGTC CTGGGCATCC AGACAACAAA TGGGGGGCAC AGGCCATGGG AGGACAGCAT 300 GAGAGGTTTG GGGGCCAGTC CGACATGGTG AACCCCATTG CTGCCCACAC CGGCTGCAGT 360 CAGCCCTGGT CCTGACAACC ATAGAGGAGG CAGGTGCTCA CGTGGTGAGT GAGCACATGG 420 CAGCATCTCC CCCCTGGGGC GCAGGCAGGG GCAGGGCGCA TCCTTCATCC TCAGGGGGAC 480 CTGTAACCAG ATCCACGGGG ATGCCTGAGG CGTACTAAGT CAGGGTCTGT TCCCAGCAAC 540 CAAGTACCCG CCACCTACCA GAAAAAGGCA CAGGGGTGGC AGGCCCCCAC TGAGACGCTT 600 TCACTCTCAG AATGGCCTGG CTGGAGGAAC TGGAAGCTGT GATGGCCTCT GAGACTCCAA 660 GAAACACTGA CATGAAACCC TAAGGTAGCT AAACGTTGGT TCTGTGGAAG TCCCCGCCTG 720 CTTACACCAC CCACTGGTTC TGCCATTATT GACTGGGGTC ATTGGTTGAG CTGTTACTGT 780 GAGTCTTGGA CAGAGATGAT CTCCTCACAT GCTCCCAACA ATTCCAGAAG GCAGGTCTCA 840 GCATCCCCAC CTGACACTAG GGAAACTGAG GCACAGGTGT GGGAGGGACG AGAATTCCCA 900 GCCAGGCCCT GGAGCTCCAA TGCTATTTAG ACACATGACC GGCAACCACT GAAGACAAGA 960 AAACACTGGG GAAGCACTGA AACCCACAGC CTTCTCAGCA TTTATTTTTC TTCAAATTGG 1020 AATCAGCTCA CCATTATTCA CCTTTGCACC CGGCACACCC TGTAGCTGCA CAAGGCTGTC 1080 AACTCAAACA AAACCACACC CTGGCTGTCA CTTACCAGCT CTCAGATGTG CACCTTCACA 1140 CATTTAGAGC AAGCACATCC GGTATTCTGG GAATTCTTGG TGGCTGAAAA TGGCCACTGA 1200 AGCCGCCTTA AATTAGCCAT CTCTCCTCTT AAGGTCGAAC AAAATGACCT AAAGACACTC 1260 AGCCTGTGGG GCAGGACACT GAGGCCCTGC TTCCCTCCCC CGTCTGCCCT GCCTGCTGAG 1320 TCCAAATATC AATTACGTGA AGCTCTCGAC TCTCTGCCTC TGACTCGCCC ATTTAACAGA 1380 AACCATACCA GACGTTTCCA GTAAGCGCCC AGCCCTGCCC TGCCAGGGAA GGAGAGCCCT 1440 GAGTGATGAC AGAGTCGGCG CAGGGAGTGA TGCTCGCCCT CTGTCTGCAG CCCAGGCTCT 1500 TAATTGCCCT GCAAATGCCG CTGGCACAAG GCAAGGCATG TGAGGTCCCA CACTCCCCCA 1560 ACCACAAACA GAAACCTCAG CAAAGCGCAG GAAATGAGAC GTGAGCTGCC CGCTGAGAGT 1620 CACTTCCTAA GAGGCCAGGG AGTAGGTTCT ACAAAGCCAC CTCAAGAGCA CATGGGCTCT 1680 CAGGCGTCCG CACTGCACTC CCGCTGACCA CAGCCTGAGT GCTGATGTGG AAAAAGGAAG 1740 GCTTTCTGGG AGGGGTGGCA TGACCTGGAT GCAGAGCCGC CGGGGGAGCC CCAGAGCCTT 1800 CTGAATTCAG AGAACCACAC ACAGCTGAGA GAGACCGGTG CGCAGGGCCA GCCACGCCTG 1860 CTCTGACTCA GCACTGCCAA GCGTCCTCCC AGGACTTCCT GAGCCCCCTC CGTGCCAGGC 1920 GCCCGCCAGG AGAGGGAGCA CCGCCGGGCT CAGCCTGTGC AGCATCCGGA ACACTGGCTT 1980 TCCAGCAGCT CACCTCAGAG AGAAACGTGC CAGGCCAAGG ACAACCCCCT GCCACAGCTG 2040 GGCACTTGGA GTTTATCAGC TGAAAACGAA TTCATCAGTA GCCTGGCTAG AAGTTATCAC 2100 TCAAATCCCA AGTCCCTGGA ACAGGGTCTG TGCTTGGCAT GGGGCATGGA CGCAGTGCTG 2160 TAGGGACAGC CATTCGTTTC CCAGGTGACG CAAAGCAGGG AAGTCAAGGC ACATGCCAGT 2220 GACTGCCCTC TCATAGGCCC CACTCGTGCC AGGCCCCAGT GTCCACCAAG ACCCCTCCCA 2280 CAGCCTTCCA AGCCCCAGCT GTATACTTCT GGGGGATCTC TGTCATCGCC 2330
|