| Tag | Content |
|---|
EnhancerAtlas ID | HS062-06404 |
Organism | Homo sapiens |
Tissue/cell | GM18486 |
Coordinate | chr16:57117780-57119420 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr16:57119182-57119203 | TTTTTCTTTTTCTTTTTCTTT | + | 6.17 | | Nr5a2 | MA0505.1 | chr16:57118741-57118756 | GTTGACCTTGGCCTT | - | 6.05 | | Nr5a2 | MA0505.1 | chr16:57118481-57118496 | CTTGGCCTTGACCTT | - | 6.31 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_03949 | chr16:57117464-57119211 | Brain_Anterior_Caudate | | SE_05811 | chr16:57117654-57119588 | Brain_Hippocampus_Middle | | SE_14630 | chr16:57117507-57118566 | CD4_Memory_Primary_7pool | | SE_17381 | chr16:57115697-57119306 | CD4p_CD25-_CD45RAp_Naive | | SE_18287 | chr16:57116804-57119160 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_22354 | chr16:57116690-57119198 | CD8_primiary |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr16 | 57118476 | 57118700 | | chr16 | 57117781 | 57118676 | | chr16 | 57117857 | 57118000 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH16I057083 | chr16 | 57117761 | 57119112 |
|
Enhancer Sequence | CTTTTAAGTG CTAATCCAGC ACTCCCACTG AAGAGTCACA TGACTGTGCC TTTTAGATGT 60
GCACACATGC CTCAGCTTGC TGCAGTCCCC ACCACTCCCC ATTGTCTTGA CACCCCACCT 120
GACCCCACTT TTTGCTGCTC TTTGACCCTG GCCTAGAGAG TTTGCATGGG TATGTTGTAC 180
CAGAGGAACA TGGCTTTGGA AGTCAGACAG GCATGGAATA GAATGTGACT TAACCCTTTG 240
CTACCTGTCT TTGAGGTATG TGGGTTAGCA GCCACCCCCA CAACACACAG ACACACATTA 300
AGACTGTTGG AGAGGTCAGG AAAGCAAGAC GAGCAAAGTT ACCGGCAAAA AAAACAAAAA 360
ACAAAAACGA GTTATCCTAG CTCTCCTCTC TTTTTATAGC CGAATATCAT ATGACGTGAA 420
GAGATGCCCA AAATGACAGA TCAGCATCCT GTCTCCCTCG TGTAGTTAAA ACAAGTTGAT 480
CTTAGGGGGA GCCTCCCACC CCATTGTGAA AAACCAAGTC GGGAGGGTGG TGCAGTTACA 540
GCTGAGCACC ACTGGAGGGC AGGCTAGCCC ACTGGCGATT CATGAGATAA CTTCCTCCAC 600
TGTGGGACCC AGAAGGAAGT TAGGAGGCGA TGCTGGGGCC TGTTCCCACC CGGCCTAGTA 660
GCTTGGGATG TCCCAGCCTA CCAGTGACAT CACCTGGGTG GCTTGGCCTT GACCTTTGCA 720
GCCCTCCAGG TTGTTCCTGG CCCCCTGCCA AGCATGAGGA GAAAGTCCTC CAGCCAAGTG 780
CCAAGCACCC ATACTTCACA CAGGGCCACC CTTACCGGGC CAGGGTCAGG GCACACCTAG 840
CACCAAATGG GCCCGTCAGC CTGCTCATGG GGGAAAAAGT AGGCAGGAAG AGGATCCAAG 900
AAGTTTACCA GGCAACCCTG GGTCCGAAAT TCTGTCTCCC TTTCCTGGGA CATGATGCCG 960
AGTTGACCTT GGCCTTCAGT GTGCCCAAGA TCACCTTCAC ACTAGAGGGG TTGCATTGCC 1020
TCCTCTCCTT GCCCAAGAAT GAAGGATGAA TCCCTCAAAG CCTGGAAATA GCTTGGCAGG 1080
GGAGCCAAGG CCGAGGAAGG AGCAGAGGAT ACCAGCAGAG GCACCTGGCC ATGGGGGACA 1140
GGGGACCCCG GAGCTCAAGG ACACTATTTT CATTTGCTGC TTAGCCATTT TACTTCTCTC 1200
TTCGCCTTTT CCCCCCTTCA TATCTGCCCA AATTCTACAC TCCAAGAAAC TTTCAGCAGC 1260
TTCCCTGAAA TAAACCATAG TATTGCGGCA CTGCAGAGCT GGCTGGGCCT ACATCAAGTT 1320
GGTGTGAAAT TGCCTTGTTC ATTTTATTAA GAAACTTCCT CTCTTGCCAC CTGCCTGCTT 1380
GGAGGCCTTA ACCGTTTTTT GATTTTTCTT TTTCTTTTTC TTTTTTTTGA GACGGAGTCT 1440
TGCTCTGTCA CCCAGGCTGG AGTGCAGTGC TGCAATTTGG GCTCACTGCA ACCTCTGCCT 1500
CCCGGGTTCA AGCAATTCTC CTGCGTCAGC CTCCTGAGTA GCTGGGATTA CAGATGTTCG 1560
CCACCACACC TGGCTAATTT TTGTATTTTT AGTAGAGACG GAGTTTCACT ATGTTGGCCA 1620
GGCTGGTCTC AAACTCCTGA 1640
|
