EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS062-00116 
Organism
Homo sapiens 
Tissue/cell
GM18486 
Coordinate
chr1:11967310-11970600 
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs71647013chr111968199hg19
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Nkx3-2MA0122.3chr1:11968331-11968344TTTAAGTGTTTTA-6.33
ZNF143MA0088.2chr1:11967995-11968011TACCCACAATGCATTG+9.63
ZNF143MA0088.2chr1:11970183-11970199CAATGCATTGTGGGTA-9.63
ZfxMA0146.2chr1:11969285-11969299GAGGCCGAGGCGGG-6.01
Number of super-enhancer constituents: 23             
IDCoordinateTissue/cell
SE_04401chr1:11967802-11970392Brain_Anterior_Caudate
SE_05426chr1:11967459-11970702Brain_Cingulate_Gyrus
SE_06308chr1:11966827-11970789Brain_Hippocampus_Middle
SE_07453chr1:11967402-11970810Brain_Hippocampus_Middle_150
SE_08423chr1:11967438-11970628Brain_Inferior_Temporal_Lobe
SE_10739chr1:11967490-11970531CD19_Primary
SE_13010chr1:11967686-11969397CD34_Primary_RO01480
SE_13010chr1:11969509-11970356CD34_Primary_RO01480
SE_13630chr1:11967645-11970731CD34_Primary_RO01536
SE_14236chr1:11967710-11969205CD34_Primary_RO01549
SE_14236chr1:11969377-11970343CD34_Primary_RO01549
SE_14675chr1:11967367-11971255CD4_Memory_Primary_7pool
SE_16078chr1:11967699-11970381CD4_Naive_Primary_7pool
SE_16518chr1:11967714-11970388CD4_Naive_Primary_8pool
SE_21206chr1:11967365-11970416CD8_Memory_7pool
SE_21842chr1:11967413-11970668CD8_Naive_7pool
SE_22216chr1:11967346-11970790CD8_Naive_8pool
SE_34570chr1:11966817-11970548HCT-116
SE_40308chr1:11967553-11971272K562
SE_54351chr1:11967622-11970499Spleen
SE_66899chr1:11967081-11970418H2171
SE_67244chr1:11967631-11970544MM1S
SE_67657chr1:11967812-11970390u87
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr11196851011969143
chr11196783011968200
Enhancer Sequence
GCTCCTGCAC TGTCCCCTCC TTTTATGCCA CCATCCCCCA GGGACCTTCC TTGGCCTTTT 60
CTCTCCTCAT TTCACAGCCT TTCCCAGGCC TTCCCCTGCT CAGCCAGTAA TCTGTCTCCC 120
AAACTCCTCA CTCTCCATAT TTCAGGCACA ACAGTTGCCA ACAGAGGTTC TCAATGTGGC 180
CTCCATCAGA ATCACACGGA GGATGAGTTC AGACTCAGGG GGCTGGGCCC AATCCCCAGG 240
CCTGCAGTAG GTCTGGAGTG GCTAGAAGTG TAAGAATTTT TTTTTGGAGA CACGCTCTCG 300
TTATGTTGCC CAGGCTGGTC TTGAACCCCT AGTTCAGGCG ATCAGCCTGC CTCAGCCACC 360
CAAAGTGCTG GGATTACAAG GGTGAGCCAC GGAGTCCAGC CAAGATAATT TTTTTTTTAC 420
TTTTTTTTTT AAGTTCAAAA AAATTCTTTA CTTATTAGGC TAATTGTGCA ATTAAAAAAA 480
AAAAAAAATT GCAAAAACCG CAATTACTTT TGCACCGATC TAATAGCTCG CCCACTGTAA 540
GTAAAGCAGG TAAAGTCAGC CTTTTTCTTC TGGGACCAGA CTCTGCTCTG CCCCGCGGTG 600
GTGGCCTCAG GCGCAGCGCT AAAACGCATG AACCATTTAA GGTATTTCCT GAAACTGGAG 660
CGTGATTGGT GAGACTTTAT TTGCATACCC ACAATGCATT GCGCACTAAA TAATGTTCGT 720
CTTTAAAATT ATTTCCCCTT TTTCCTTCAA CATATCTTTC TCGGAACCGA GATTGCTGTC 780
CCAGAATTGT CTGAAGAAAA AGGCTGAAGT CAATAGCTCT TTTGGGCCGA AGGAAAGTTA 840
CCATTACCCG TTTAGGAGTA GCCGTTACCT GAGAACTGTA GTGTCGACGA CTGATGTTAT 900
ACTCTGGTTT CTCTTCAAAT CGTATAAATC TTTCGCCTTT TACTAAAGAT TTCCGTGGAG 960
AGAAACGAGT GTGAGTCTGA AACCAATTTT TTGAGGCCTT GCGTTTCTTA GCAGGGCTTA 1020
TTTTAAGTGT TTTAAAAACA GATGCGATTC CGTTAAATCG CGTGTGGAGC TATGTAAAGT 1080
GTATTATAGA ACAAATGCGA GTTACGGTTT TTCAGCTTTT CGCTTTGTTA AGGTATGTGA 1140
TATCAATTGT ATTGCATTTC TGAGCAGTTA TAATATTAAG ATGTTGGGGT GGCTTACTGC 1200
TTTTGACCAA GAAGTAGGGT TTGTTGGTTG ATTACACCAG TGGTTTTTAA CCCCAGCCAC 1260
TGAGTGATGG AGGGTTACCG ACTCACAAGC GAGCATTAAC GCCTGAGGTC CGCCTGCTGT 1320
CAGGGCAGCA AGGCATCAGA TTCTCCTAGG AGCGGGAACC CTATTGTGAA CTGCGTATAC 1380
GAGGTATCTA GGTGCGTGCT CCTTTTAAGA ATCTAATGGC TGATGACGAG GGGCACAGTT 1440
TCAACCTGGA ACTGTCCACA CCCCCTACCC ACCTTCCCCC GCCCTTGGAA AAACTGCCTT 1500
CCATGAACTG GGTCCCTTGT GCCAGAAAGG TTGGGGACCG CTGGACTATC CGATCAAATG 1560
AAGCAGGGAC TCGGGGCGAG CTCCCCCGCT GCTCCCGCCG GCTTCTCCGT GTAGAATCGA 1620
AGAAGGCAGT CCCAAGGGCT CTTCTGCCCC GTATCCCCGC CTGAGGAGCG TGCCAGGCGC 1680
GCAGCTAGTC CTCCCCCGAC CCAACCGGTT TGATGAAACG CAAGAGAAAG TGAATTTTCC 1740
AGCCACTCCC ATTGGCCAGA ATTCGTCTCA GCCGCAAGGG AGGCTGGGAA GTGCAGTCAT 1800
GCCTTCAGGT AGCCGTGAGC CCTGCTAGCG ATAGGAGATT CTAGAGAGAG GTTGAGTACT 1860
GGGGAGGAAA AACTAGCAGG GTCTGTCCCA GTAAAGGAGG GAGGAAATCC ATCGCAAAAA 1920
ATCCTGACCC CCAGGCCGGG CGCGGTGGCT CACGCCTGTA ATCCCAGCAC TTTGGGAGGC 1980
CGAGGCGGGC GGATCACCTG CGGATCACCT GAGGTCAGGA GTTCGAGACT GGCCTGGCCA 2040
ACATGGAGAA ACCCCGTCTC TACTAAAAAT ACAAAAATTA GCCGGGCAGG AGGGCGCATG 2100
CCTGTAATCA CAGCCACTCG GGAGGCTGAG GCAGGAGAAT CGCTTGAACC TGGAAGGCGG 2160
AGGTTGCAGT GAACCGAGAT CGCGCCACTG CACTCGATCC TGAGCGACAG AGCGAGACTC 2220
TGTCTCAAAA AAAAAAAAAA AAAAAAAAAA AAATCTACCC CGGGCTCAGG CCCTGAAGCA 2280
GCCGCCCACA GCCCAGCCCC GCCGTGCCCC GCCGTGCCCC GCCGTGCCCC GCCGTGCCCC 2340
GCCATGCGAC TCAAAGCCCC ATTCAAGCTA CGTAGGAGGG TAAATTGTCC TTTTCCCCCA 2400
AGGCCAGCTG CTCCTCCAGA AGCCAGCTCT GGTCCTTCAG ACTCAAATAC TAGGGAACAA 2460
TGTTTTCTCT GAGTTTTGAG TGTGTTTCTT GTTTCAGAGT AAATACGAAC CGTCGTAATG 2520
GCTAAGGGCA TCTACTTTTA AAACGCTCAA ATAAGCCTTG CTAAAAAATG CAAGACCTCT 2580
AAAAAATTGG TTTAAAACTC AGAATTATTC CTCTCCACGG AAATCTTTAG TAAAAGGCGA 2640
AAGATTTATG CGATATGAAG AGAAACTAGA GTAAGAACTT CGATGAGTGG CACTCAGTTC 2700
TCAGGTAATG GCTACTCCCA ACAGGCTAAT GGTAAATTTC TTTCTGCCCA AAAGAGCTAT 2760
TGACTTCTGC CTTTTTCTTC AGACAATTCT GGAACAGCAA TCTCAGTTTC AGGAAAGATA 2820
GATTGAAGGA AAAAGGGGAC TAGTAATTTT AAAGACGAAA ATTATTTGGT GCACAATGCA 2880
TTGTGGGTAT GCAAATAAAG TCTCAGCAAT CAAGCTCCAA TTTTGACAAA CTGGTGAAGC 2940
CTTAGGGACT CCTCAAAAAA AGGTTTTCTG TTGCTTTTGT TTTGTCTTAA ATTTCTGATT 3000
TTTAATGTTT GTGGGTACAT AGCATGTGTA TGTATGGGTT ACATGACAAG AGAAAGGTTT 3060
TGTTTGTTTG AGATGGAGTC TTGCTCTTGT CACCCAGGCT GGAGTGCTGT GGTGCGATCT 3120
CAGCTCACTG CAACCTCCGC CTCCTGGGTT CAAGCGATTC TCCTGCCTCA GCTTCCCGAG 3180
TAGCTGGGAT TACAGGTGTG AGCCACCATG CCCGGCTAAT TTTTGTATTT TTAGTAGAGA 3240
TGGGGTTTCA CCATGTTGGC CAGGCTGGTC TCGAACTCCT GACCTAAGGT 3290