Tag | Content |
---|
EnhancerAtlas ID | HS061-00501 |
Organism | Homo sapiens |
Tissue/cell | GM12892 |
Coordinate | chr1:27069560-27072020 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr1:27070107-27070122 | GAGGTCAAGAGTTCA | + | 7.64 | RARA(var.2) | MA0730.1 | chr1:27070097-27070114 | GGGTCATCATGAGGTCA | + | 6.95 | RARA | MA0729.1 | chr1:27070107-27070125 | GAGGTCAAGAGTTCAAGA | + | 6.45 | REL | MA0101.1 | chr1:27070559-27070569 | GGAAATCCCC | - | 6.02 | RREB1 | MA0073.1 | chr1:27071320-27071340 | CCCCCACCCACCCCCTCAGA | + | 7.84 | SPIC | MA0687.1 | chr1:27069815-27069829 | TTCTTCCCCATTTT | - | 6.04 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_04138 | chr1:27069535-27072413 | Brain_Anterior_Caudate | SE_05292 | chr1:27069307-27073105 | Brain_Cingulate_Gyrus | SE_06169 | chr1:27068205-27072713 | Brain_Hippocampus_Middle | SE_07337 | chr1:27070095-27072347 | Brain_Hippocampus_Middle_150 | SE_08106 | chr1:27069480-27072753 | Brain_Inferior_Temporal_Lobe | SE_09344 | chr1:27065322-27075523 | CD14 | SE_11056 | chr1:27064362-27075593 | CD20 | SE_13430 | chr1:27069503-27071866 | CD34_Primary_RO01536 | SE_14400 | chr1:27069952-27073071 | CD4_Memory_Primary_7pool | SE_18323 | chr1:27064992-27075387 | CD4p_CD25-_Il17-_PMAstim_Th |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I026739 | chr1 | 27065546 | 27073238 |
|
Enhancer Sequence | ACCACCAGTT GTTTCGTGCG TGTTTTGGGG ACCCTGGCTC CCAGTGCCTT ACCCAGTTCA 60 GAACCCATAG TGGAGCCATC CACAGCTCCC AGCATACCTC TGCAACTTCA TCTCCAGCCA 120 CTCATTTGTA CCTTAAGCTC CTCACAATTC CTGGTCCTCT TGATTAGGAT GTATACCTGT 180 TTCTCTCTCT TTCTGTCATG CTCAGCAAAC TTCTACTTTG GCTTCAAAAC CTAGCTGGAA 240 TACTCTCTCT GAGACTTCTT CCCCATTTTC ATATTGGCAT AGCCTTATGC TGGTACCTCT 300 GCTTGAACTG TATCTGACAT CTGTCATGTT GTGCCCAGAA CAGGCAGATA TTTGTAAACC 360 TTTGTTGAAT ACCTCCTAGA TTCTTGCTAC CTAGTTGAGC TTTGGGAGCT GACGTTTTGT 420 TGTTTAGGTT TATTGAGAGG AGTGACAAAT CCTCTCAATA AATGCTTTAA AAATTAGAAC 480 ATTTGGCTGG GCACGGTGGC TCACACCTAT AGTCCCAGCA CTTTGGGAGG CTGAGGCGGG 540 TCATCATGAG GTCAAGAGTT CAAGACCAGC CTGGACAACA TGGCGAAACC CTGTCTCTAC 600 TAAAAATACA AAAATAGGCA GGTGTGGTGG CAGGGGCCTG TAGTCCCAGC TACTCGGGAG 660 GCTGAGGCAA GAGAATCGCT TGAACCCGGG AGGCAGAGGA TGCAGTACTC CATCTCAAAA 720 AAAAAAAAAA AAAATTAAAA CATTTGAAGG ATTTTAATTT TACACAGTTT CTGTTCCCTT 780 TTGTTCATTT CATGATAGAA GGAGAGAGGG CCCACAGTCC TTATCTAGGT TTTTGATGGT 840 TGATTTTCAA AAAGATAACA GAAATGTCAC TAGCGATTTT GGTAACCAGA GAAGCAGGGT 900 CTTTCTGAGG TTGGTGACCT GTTTTCTTTA TAGCTGACCA TGTATCTGTG CCTGCTCCCC 960 TTGAATTATA GCCCAGGTGC TCTCTCAGAG TCTCGAAAAG GAAATCCCCA CCCCCTCTGT 1020 CATATCTGCC CAGACTGCTA AGAGCAGCAT GTACCCTGTG CATGTAGCCA TCCCTTCTCT 1080 AGAACGCTGG TTCTCTGGGC TGGACTGGCC AATCCGCTTC TCCATCTTAG TCACACTGTT 1140 CCAACCCTGA TACTGCCTGC TGACTGCCTG AGCCTGTGCT GCTTGCAGCA GATTACTGTA 1200 TGCTTGTTCC TGGGCCCATT TCCTGTTTCT ATTCTAGTCG CTGGTGGCTC AGCTCTGCTT 1260 CCTGCCTGTG TGTCTCACAC AGATTCCTCT TGCTGGAACC TTTTGTTTCC TTCGGAACAG 1320 CCTCAATCTT TGAAAAGCAA CTGAGCCTTA ACTCTAGTAT GATGGCTCTT GAGTCACTTA 1380 GTCCTACAGA GGTCTGGCTG GAAGTACCTC TTCCCCATTA AGCACACCGT TTGAATTTTA 1440 CCTTGTTTTT CAGTTTGTCG TCAGCCCTGC TGTAGGAAGT TAAGTTGGGC CAAACTTGTC 1500 CTCACTTATT AGTACACAGA GCTATCGGGA CTGGTATGTC CTGATTCTTT TGTACCTGGA 1560 GCTTTTAAAT GTATTTCCTA CTACTCAAGA AGACACTTGG TATCCTCTCT GGCCCAAGCT 1620 TCCCTGAAGC CCAGGTGATA CTTATTTTGA GTTGGGCAGG TTATGCCATC CTCAGCAGAA 1680 TAACAGGCTG CAGAAAACAT AGGGATGGAA AAGAAAGCGT GTGCTGACTC AACCCTCCAT 1740 CCTGTGTGAG CAATTCAAAC CCCCCACCCA CCCCCTCAGA GCTTAGGGTG AGAGAGAGAA 1800 AGTACAGTGA GGTTGTAAAA AGGGAAGAAG TGAAGGAGGT TGTCCTGGAC AAATGTATTT 1860 AAAGGCCTAA GGCTCCCCCC TCTTGCCCAT TTCCTACAAA AAATATGCTT CGTGAATAAA 1920 TCTTTTTTCT CTTCCTTTAC AGCCACTCTT TTGGGATCAT TTGATAATAC TGAGTCAGAG 1980 GATTTCTGTA CTGGACCCTA GGTCTAGCTA TGTTTAAAAG AGAGAGATTT AATATAGGGA 2040 ATTTGGGCTT ACAACTGGAA GGAGTGAGGG AGCTTGCTCT AGGCTTGGCC TCCAAGAAAC 2100 CAGACCCAGA TTTAACCTAG ATTTGACCTA CCAGGGGAAC GTCTATCTCG GAGCTACTAT 2160 TAGATTGATT GCTCTTGAAT CATACCCCTA AACCTGTGGT CCAGAATCAG TAAACTGGAA 2220 TCAAGAAGCA GTAGCTGCTG CCGCCAGAAC CAGCACCCAG TTAAGTGGAG GATGGAACCA 2280 AAATGCTCCT GCAGAAACAA GTAAAGGAGA CAGAAATATG GTCTCTGCTT ACTTTGATCT 2340 AATCTCATGA GTCAGCTTCT CATTAGCAGA AGCTGAATTG TATCCAAAAC CAAGGGATTC 2400 TTGGAAATTT CGTTTTTAAG CTTTTTAACC TCTACAATTA GAGAAAGAAT AGAATGGAGG 2460
|