Tag | Content |
---|
EnhancerAtlas ID | HS060-22183 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr20:62173940-62174660 |
Target genes | Number: 12 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nkx2-5(var.2) | MA0503.1 | chr20:62174356-62174367 | CTTGAGTGCCT | - | 6.14 | PLAG1 | MA0163.1 | chr20:62174446-62174460 | CCCCCTAGGACCCC | - | 6.2 |
|
| Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
SE_24714 | chr20:62164593-62175178 | Colon_Crypt_3 | SE_26873 | chr20:62172721-62174292 | Esophagus | SE_32344 | chr20:62167366-62174290 | Gastric | SE_35020 | chr20:62173025-62174570 | HeLa |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I063541 | chr20 | 62173257 | 62174661 |
|
Enhancer Sequence | GGAGGGTGGG CAGGGAGGCT GGTCAGCGTG GGCCCCTGTG CTCTGTCCCA GGCACAGCCC 60 CCCACACCAG GCCTCTGGCG GGCACCCCTG TCCCCAGCAC ACACTCACCC CACCCTGGCT 120 GGGACAAAGG GGAGTGGGTG CCAGGCTTGG AGGCCCGGCC CAGCCCCGTG GGAGCTCATT 180 GCTCTGGGGG CCTAAGTGGC ACCTTTGCCC CAGCCGGATA TCCGTCTACA CATGCTCATT 240 ACTGCCCCTG GCCGCGCTGT CATTATGAGA CCAGAGAAAC CAGACTGCTG CCCTGGCCCT 300 CGGCAGGGTG GCTCACATCG GGGACAGTCC CCGGGATCCA GTGTCTCCAG CCCAGGTGCA 360 GCATCTTGTG ATCTGCCTCT CCTCCCACAC CTTCCGCCCT TGGGGCCTGG GGCAGCCTTG 420 AGTGCCTTCC CCAAACTGGC CCCACCCTCC TGGCTGCTCC CCTGCAGAGC TGGGCACTGC 480 TACAGGTCTC CTTTCCCCAC TCCCAGCCCC CTAGGACCCC AGGAATCCCA ACAACCCTCA 540 GAGGCACCCG CAGAGAGCAG AATGTGCTGG AACCGCTGGG ATGCTCCGAT GCTCCCAGGC 600 CTGGGCAGGG CCCTGGAGCT GCGCCTCTGA CAGCCCCAGG GGTTTTGTGA CGGGGTGGGG 660 AGGAGCACCT AGAACAGGGC CATGCCTCGG GCCCAGCATG GGGCAGCTTG GCAGGCACAG 720
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