Tag | Content |
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EnhancerAtlas ID | HS060-21924 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr20:47385270-47386530 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HSF1 | MA0486.2 | chr20:47385387-47385400 | GAATGTTCTAGAT | - | 6.03 | PLAG1 | MA0163.1 | chr20:47385360-47385374 | GGGGCTCAAGGGGA | + | 6.13 | ZNF263 | MA0528.1 | chr20:47386109-47386130 | CCCTTCTCCCTCATCTCCTCC | - | 6.45 |
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| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_03141 | chr20:47385322-47385955 | Brain_Angular_Gyrus | SE_03860 | chr20:47382832-47386797 | Brain_Anterior_Caudate | SE_04767 | chr20:47384074-47386851 | Brain_Cingulate_Gyrus | SE_05768 | chr20:47382378-47387025 | Brain_Hippocampus_Middle | SE_06681 | chr20:47384891-47386715 | Brain_Hippocampus_Middle_150 | SE_07719 | chr20:47383716-47386380 | Brain_Inferior_Temporal_Lobe | SE_09151 | chr20:47385126-47409110 | CD14 | SE_11697 | chr20:47372452-47388108 | CD20 | SE_12281 | chr20:47385192-47387065 | CD3 | SE_14588 | chr20:47382873-47387101 | CD4_Memory_Primary_7pool | SE_16488 | chr20:47385150-47387047 | CD4_Naive_Primary_8pool | SE_18054 | chr20:47381442-47388271 | CD4p_CD25-_CD45ROp_Memory | SE_18819 | chr20:47382690-47388059 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19386 | chr20:47382668-47387341 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20065 | chr20:47381307-47389626 | CD56 | SE_21439 | chr20:47383260-47387291 | CD8_Memory_7pool | SE_22493 | chr20:47382522-47387893 | CD8_primiary | SE_42516 | chr20:47385271-47386674 | Lung | SE_50554 | chr20:47385239-47386786 | Sigmoid_Colon | SE_53697 | chr20:47384786-47387081 | Spleen | SE_59612 | chr20:47363420-47493230 | Ly4 | SE_65415 | chr20:47385464-47386781 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 47385524 | 47386500 | chr20 | 47386003 | 47386431 | chr20 | 47385455 | 47385503 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I048757 | chr20 | 47373828 | 47387472 |
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Enhancer Sequence | CACTGCACTC CAGCCTGGGT GACAAAGCGA GACTCTGCCT CAAAAAAAAA AAAGAAAAGT 60 CGTCATTCAA GGCTGGATAA AGACTGGCAA GGGGCTCAAG GGGACTCTGG AGGCAAAGAA 120 TGTTCTAGAT CTTCACCTGG TGGTGATGCA TACGTAATCA CCAATGGAGC TGTGCACTTC 180 ACTGTCTGTA ATTATCCTGC AACAGAAACT ATTCCCTTTT TTTTTTTTCA GCAAAGGGTT 240 TAAAAGGAGA TTGTCACCGT CCACCCTGGT TTGTCTACTG TCCACGCATG GGTTGTCCTG 300 GCTCAAGCCC TGAGGGCCAA TACATCGTTC TGGCTTCAGG CAGAGCCAGA CCCCATTCCC 360 ATTCCTTCTA CAACTGTGCA TCCACGAAGC CCTGGCTTCT TTGAGGCCCG TTGCCAAAGA 420 GACGAGCCAC CCTCCACACA CACCCCCTCG CTGCCTCCCA ACCCTGCTTC TAAGAAGATT 480 CGGGAACAGG AAGCCTGTGT CTGCTCTCAG GTTCTGAAGC AAAGAGGCTG GGGGTGGTGG 540 TGCGGGGGAG GGGAGATGAG GGGCTGCCCC GTTGAATGAG ACGTGCCTTG AATCCTGAGG 600 GGATCCTCTC CAGGTGTGTG AGAGGTGTCC CCCGCCCACC ACAGGCACAG GGACAGCCAC 660 AAACACCTAC TCTACCGTCG TCGCTGGGGC ATCTCTAGGA GCCCCAGCAC CCACTAGGCA 720 TGGGGCCGGC TTCGTACATC AAAGAGCCCT TGCATGTTGC CTTTCTGCTT AAAATCCTCC 780 AACAGAGGCT GCGCTATCAG AATGAGCTCA CACTCTGTGA CCTCACCTCC TACGCAACTC 840 CCTTCTCCCT CATCTCCTCC CACACTGGCA CCCTTGAAGG TGCAGAAACA CATGAGACAG 900 GCTCTTGCCA CAGGACCTTT GCACTGGCTG TCCCCTCTGC CTGGAACGCC TGTCACCACG 960 TAACCACATG ACTCATTCAC TCTGCTCCTT CAGGTCTCTG CTCAAACGTC ACCTCCTCAG 1020 TGAAGCCTGC CCTGCCCACA CCATTGAAAA CTGCCACATC TTCCCAGCAG CCCAGCCCTC 1080 TAATTTTGCT TCATGTTTTT CCATAGCACT TACCACCTGA GAACACTACA AATTTTCCTT 1140 GGCTGACACC TTCACTGTCT GTCTTCACTG CACACACGGT GAGGGAGAGA GCTTTTGTCT 1200 GTATTGTGCA CTGCGGCAGC CTGGACACTC AGTACACAGC AGGTGCTCCA TAAATCACTT 1260
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