Tag | Content |
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EnhancerAtlas ID | HS060-21923 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr20:47382740-47384410 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GATA2 | MA0036.3 | chr20:47384144-47384155 | TTCTTATCTGT | + | 6.14 | Gata1 | MA0035.3 | chr20:47384144-47384155 | TTCTTATCTGT | + | 6.62 |
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| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_03860 | chr20:47382832-47386797 | Brain_Anterior_Caudate | SE_04767 | chr20:47382502-47383832 | Brain_Cingulate_Gyrus | SE_04767 | chr20:47384074-47386851 | Brain_Cingulate_Gyrus | SE_05768 | chr20:47382378-47387025 | Brain_Hippocampus_Middle | SE_06681 | chr20:47383102-47384225 | Brain_Hippocampus_Middle_150 | SE_07719 | chr20:47383716-47386380 | Brain_Inferior_Temporal_Lobe | SE_09151 | chr20:47371448-47384981 | CD14 | SE_11697 | chr20:47372452-47388108 | CD20 | SE_12281 | chr20:47382955-47385081 | CD3 | SE_14588 | chr20:47382873-47387101 | CD4_Memory_Primary_7pool | SE_16488 | chr20:47383441-47385146 | CD4_Naive_Primary_8pool | SE_18054 | chr20:47381442-47388271 | CD4p_CD25-_CD45ROp_Memory | SE_18819 | chr20:47382690-47388059 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19386 | chr20:47382668-47387341 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20065 | chr20:47381307-47389626 | CD56 | SE_21439 | chr20:47383260-47387291 | CD8_Memory_7pool | SE_22493 | chr20:47382522-47387893 | CD8_primiary | SE_33505 | chr20:47381210-47384027 | H2171 | SE_42516 | chr20:47382707-47384709 | Lung | SE_50554 | chr20:47383418-47384673 | Sigmoid_Colon | SE_53697 | chr20:47382756-47383460 | Spleen | SE_59612 | chr20:47363420-47493230 | Ly4 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 47383939 | 47384393 | chr20 | 47384107 | 47384389 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I048757 | chr20 | 47373828 | 47387472 |
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Enhancer Sequence | TGAATCATCC TGAAACCATC CCTTCCCCAC CCCTAGGTCC GTGGAAAAAA ATGTCTTCCA 60 GGAAACCCGT CCCTGGTGCC AAAACGGCTG GGGACCACTG GCCTAGATCA CTTAGGCATC 120 CCTGGGTGGA GTGACACAAA GGGATCGTCA CAAAAGGCAA ATGTGGTCAC CCACTGCCCT 180 GCCCAGCCCA TCAGCCGCTC CCCGCTTCTC TGAGAACCCC ATCCAGAAGG GCTCTGCAGG 240 ACCTGACCTC AGCCTCCAAG CTGTGCTGCA GCCAGACCGG CCTCCAGGAT CCTCAGCTGT 300 TCCCCAAACA CACCCAGCTT GCTCCTGCCC CCAGGCCTCA GCACAGGTGC TCCCTCCACC 360 TGCAACACTC ATCTCCCTCC TGCCAGCTGC TTCAAGTCTC ACATTCCCTG CCCTCCCCAG 420 TGAGATCCAA GGTTGGTCAG GGCCCAGGAA ACCCATGCAT AGGCTCCCAT ACTTAGTGCC 480 ACCATGACTA TAACTTAACC TTGATTTATG TGATGATTCA ATTAATAACA GGCTTGCCCA 540 CCAGCCTAAG ACCTCTCAGA GGTCCCACTT AGTCCCAGTT TCCATCTTCT TTCATTTATG 600 CTCATTCTTG GTGAGTGAGT GGATGGACGG GTAGAGGGAG GGAGACCCCT TTCTCTGGGG 660 CAGGTTCCTC ACCTGTAAAA TAGACACTGT GTGATAACAC TGCCGGCTTC ATGGATTACC 720 ATGAGGACTA CGAGAAATGC TGCACACTAG CTGAATGATT TCAGATGACT GATTCCTCCT 780 CTCTGGGCCT CAGTTTCCCC ATCTGCACAG CGCCCACCAC TCAGGGCCTG CTGACCTGGT 840 TGCCAAATGT AGCCCTGCCA CAGACTCGCT GTGGGACCCT GAGAAAGCTG CTCCCACACT 900 CTGTTCCCTC GTCCGCGAAA CGGGGAACAG TGGTCAGATG AGAGGATCTC AAAGGGCTCC 960 CAGCTCTGGG GCTATGAGGT CAGGCCCACA CATTCTAACC ACCTCGACTC CCTGCCTTCC 1020 AGCCAGACCA GTGACAACCA GCCACACCAC AGACTACGAC AGCTCACCAG GGATTCTGCA 1080 AGGGAGTCTT TCAATGGCTC CTTCCCTGGG GGACCTGACT ATGGGACAGA GCCCCCGAGG 1140 AGGGAGGGGA GATGATGGAA CCAGAGAAGC ATGAAGAAGC CCCCTCAAAC GAGGGCCCTG 1200 AAGAGGGGAT GGCTGAGAGC TGGAAGATGG AGGTTCTGGT GTCAGACAAG CTGGTTCAAG 1260 TCCCCACCTG TCAGCGGGGG AGGGTACGTG GGCCTCTGAA CCTCAGTTTC CACCTAACTC 1320 AGAGAAGGAA ATAGATAACG AACCCTAACT TCAGAGTCGC ACCAGAGTGA AATGCCAACG 1380 CTTACGTTAC CATCACTGAT GGGGTTCTTA TCTGTCAGTG CATCGACGTA AAAGCAGCCC 1440 TCTCCAACTA CAGACCACGC TGTACTTTCC CGACATTTCC CCAGAGTCGT GTGTCTCATT 1500 CCACTGCAGC CCCAATGCCT AGTCTGCCCT TCCTAGGTCA CCCCAGGCTT TTTCTTACCT 1560 CAGGGACTTT GCACGTGCTG TTCCCCGCCC CTCATCGTCA CTGCACAGGA TGCTCAAATA 1620 TCACCTCCAC AGAGAGCCTC CCCTGACCAT CCTGGCTGAA GCAGCCTCAC 1670
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