Tag | Content |
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EnhancerAtlas ID | HS060-21922 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr20:47376840-47378320 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Lhx3 | MA0135.1 | chr20:47377966-47377979 | GTTTAATTAATTA | - | 6.19 | Lhx3 | MA0135.1 | chr20:47377969-47377982 | TAATTAATTAGTC | + | 6.46 | mix-a | MA0621.1 | chr20:47377970-47377981 | AATTAATTAGT | + | 6.62 |
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| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_03141 | chr20:47377285-47377915 | Brain_Angular_Gyrus | SE_03860 | chr20:47376834-47379286 | Brain_Anterior_Caudate | SE_04767 | chr20:47374177-47381371 | Brain_Cingulate_Gyrus | SE_05768 | chr20:47372153-47381480 | Brain_Hippocampus_Middle | SE_06681 | chr20:47376689-47379063 | Brain_Hippocampus_Middle_150 | SE_07719 | chr20:47376760-47379397 | Brain_Inferior_Temporal_Lobe | SE_09151 | chr20:47371448-47384981 | CD14 | SE_11697 | chr20:47372452-47388108 | CD20 | SE_12281 | chr20:47374377-47379251 | CD3 | SE_14588 | chr20:47376111-47380175 | CD4_Memory_Primary_7pool | SE_16488 | chr20:47376206-47379253 | CD4_Naive_Primary_8pool | SE_18054 | chr20:47373574-47380725 | CD4p_CD25-_CD45ROp_Memory | SE_18819 | chr20:47372243-47381163 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19386 | chr20:47373594-47379242 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20065 | chr20:47373626-47381257 | CD56 | SE_21439 | chr20:47376128-47379416 | CD8_Memory_7pool | SE_22493 | chr20:47373560-47381976 | CD8_primiary | SE_32607 | chr20:47376741-47379200 | GM12878 | SE_33505 | chr20:47362772-47378230 | H2171 | SE_42516 | chr20:47376075-47379366 | Lung | SE_50554 | chr20:47376060-47379350 | Sigmoid_Colon | SE_53697 | chr20:47374110-47379377 | Spleen | SE_59612 | chr20:47363420-47493230 | Ly4 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I048757 | chr20 | 47373828 | 47387472 |
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Enhancer Sequence | TTATTTTTAT TAGTTTTTTC CATCCTGCAA ATAGCTCTAT TATTATAGAC TGCCTGCTTC 60 CGAGTCTCCT GAGGTGAGAT GAGAAGGGGA AGGCTTTATA AACTGCAGAG CCCCCCACAT 120 CCTCATCACC ACCAGCGCAC CCCTCTGCCC TGCCCCATCC TCCTTGCTGA CTGCCAACCA 180 CGTGACTTCA GCAAGTCACC ACACTTCTGA GTCAATTTCC TGGACCAAAC AAAAAGGGGG 240 GGAGGAGTAG TTGTTGAGGT TTAAGTGAAA TGATGCAGGT GAACACTTTG TAACTACAAA 300 CACTTCCTGG AAAAAGTGGC AGAAAGGCTG AGCCAGGAGA GGGAGGCTGG ACTAGGAAAG 360 GGGCAGGAAG TTGCTTGTGA TGATATTCTA GGGGGACAAG TCCTCTCCGA GTACCAACCA 420 TCCCAGCAAG TGTTAACCAG GGCCTGCCGT GCACCAGGCA CCGAGCTGGG TGCTGGAGAC 480 ACAGATATAA GCCATGACCC TGCCACGGAA GGACTTATGC ATTCTTACAT TCGCCTGTGT 540 AGTCAGCAAA TACTTACTGC ACACCTATTA TGTGCCAGGC ACTGCGCTAA GAGCCAATGA 600 CACATCAGTG AATGAACAAA TCAGACTAAC TCCCCACCTT CACAAAGTAG TGGCAGAGAC 660 AGACTATACA CTGATTTTAA AATAAAATGG CAGGTAGGAA TGATTGCTAC AAAGAAAACT 720 AAAGCAGGGT AAGAAAACAG AGAAGGATAA GGTGGGAATG CCATTTCAAG GAGCTGTTCA 780 GAGAAAGCCG TTCTGAGAAG ATGGCATTTG AGCAGACACA GGGAGCAAAC AGCATTGCGT 840 GTATCGGAGG ACACAGCATC ATGGGCAGGG TCAACAGCCG GGGCAAAGGC CCCGAGGCAC 900 ATTCAGTCTT TCCAGGACAA TCCTATCGAA AACGTCTATC CCTGCTCTGT TTTCCTCACA 960 GCACCTGTCA CCATGGACAT TATGTGTGTT TATATCAGTC TATTATCCAT CTAGCCCACT 1020 TGAGTCTCAC CTCCAGGAAG GCAAGGATGT TTGTCTGTCT AGGTCACTGT GGTGTCCCAG 1080 AGCCTAGGAT TGGACCCAGC ACACAGCAGA CCCTCGAAAA GGATGTGTTT AATTAATTAG 1140 TCAATCAATC ATCTAGAGTA GACTACTCCC ACCCCCACCC AGATTCTAGG CCCTGGTAAA 1200 AGGTGCCCAG TTCTCACCCC ACCCCGCCCC GTTCCCCACC ACATCGGGAG AGGAAGTTGA 1260 TGCAAAAAAC AAGTTGCAAC AACCTGTCAT GAAGAGGTCT GATGCAACAG TGGGGGAAGG 1320 CAGTGGGGGA CACTGAGAGG AACCCAATGC TTTTCTTCAC GCAGCCCCCA TCAAGGGGCT 1380 GGGGCCTGGC CTACAAACTT TCCTGAGTTC ACCAACAACC CATCCTTCCT TCAACAGATA 1440 TTTATGCAGA GCCTCCTCTA CATGATGGGG CTACCTTATG 1480
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