EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS060-21510 
Organism
Homo sapiens 
Tissue/cell
GM12891 
Coordinate
chr20:30304780-30306170 
TF binding sites/motifs
Number: 1             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
RUNX1MA0002.2chr20:30305443-30305454AAACCACAGAA-6.32
Number of super-enhancer constituents: 59             
IDCoordinateTissue/cell
SE_00546chr20:30297989-30306428Adipose_Nuclei
SE_01656chr20:30304224-30306272Aorta
SE_03156chr20:30304345-30306204Brain_Angular_Gyrus
SE_03894chr20:30297618-30312523Brain_Anterior_Caudate
SE_04818chr20:30291888-30312530Brain_Cingulate_Gyrus
SE_05813chr20:30291812-30312465Brain_Hippocampus_Middle
SE_06739chr20:30297611-30312332Brain_Hippocampus_Middle_150
SE_07749chr20:30292115-30312408Brain_Inferior_Temporal_Lobe
SE_08789chr20:30304829-30305056Brain_Mid_Frontal_Lobe
SE_08789chr20:30305732-30305932Brain_Mid_Frontal_Lobe
SE_13448chr20:30303541-30306370CD34_Primary_RO01536
SE_14426chr20:30302978-30312324CD4_Memory_Primary_7pool
SE_18483chr20:30302871-30312578CD4p_CD25-_Il17-_PMAstim_Th
SE_19226chr20:30302979-30312159CD4p_CD25-_Il17p_PMAstim_Th17
SE_20764chr20:30302878-30312381CD8_Memory_7pool
SE_22440chr20:30303825-30312264CD8_primiary
SE_23622chr20:30304312-30305160Colon_Crypt_1
SE_25330chr20:30302953-30312495DND41
SE_25933chr20:30303441-30311921Duodenum_Smooth_Muscle
SE_26879chr20:30303882-30305348Esophagus
SE_26879chr20:30305408-30306284Esophagus
SE_30903chr20:30303024-30306306Fetal_Thymus
SE_31430chr20:30304321-30306278Gastric
SE_33407chr20:30302870-30306305H2171
SE_34309chr20:30291576-30306320HCT-116
SE_34643chr20:30298140-30312397HeLa
SE_35852chr20:30303427-30306293HMEC
SE_36989chr20:30297525-30312332HSMMtube
SE_38141chr20:30303934-30306179HUVEC
SE_39853chr20:30303646-30306330K562
SE_40644chr20:30297536-30312142Left_Ventricle
SE_41648chr20:30305472-30306266LNCaP
SE_42121chr20:30295482-30306315Lung
SE_43515chr20:30291879-30312193MM1S
SE_44365chr20:30304163-30305187NHDF-Ad
SE_45708chr20:30304068-30306118Osteoblasts
SE_47264chr20:30303610-30306362Panc1
SE_48182chr20:30304554-30305954Psoas_Muscle
SE_48890chr20:30304407-30306299Right_Atrium
SE_50155chr20:30304194-30306264Sigmoid_Colon
SE_51509chr20:30303939-30312172Skeletal_Muscle
SE_52373chr20:30303600-30306295Small_Intestine
SE_53471chr20:30304367-30306295Spleen
SE_55108chr20:30305375-30306100Thymus
SE_55770chr20:30302950-30306293u87
SE_56767chr20:30303028-30306253VACO_400
SE_57375chr20:30304250-30306250VACO_503
SE_57919chr20:30304662-30305261VACO_9m
SE_57919chr20:30305360-30306242VACO_9m
SE_58612chr20:30249012-30312162Ly1
SE_59155chr20:30248900-30312556Ly3
SE_61228chr20:30249013-30312452HBL1
SE_61455chr20:30248898-30312277Toledo
SE_62770chr20:30248811-30312352Tonsil
SE_63330chr20:30279572-30311864NCI-H82
SE_63683chr20:30304565-30305188HSMM
SE_64478chr20:30304021-30306145NHEK
SE_67146chr20:30291879-30312193MM1S
SE_67821chr20:30302950-30306293u87
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr203030514130305549
chr203030594030305996
Enhancer Sequence
AAGAGGATCC AGGAGTAGAG TGACTCCTTC AAAGAAAAAA GAGGGAGTCC TTAGGGAGGA 60
CTCTGTGGAA TTAGGTTGGA GGTTGGGTGG GGACAGGGCC TCTGCTTAAT TAAGGCAGTA 120
GGAGATTATA CTTCCGTAGA AAAGCAGTAC ACTGGGAATT ACCCCTATGT CTATCCACAT 180
TAAACTCAGG CAAAACCACA GTTGCTTCAA GAAAGCCCCA TGATGGAAGG CTGAGGGCAC 240
TGGCAAAACC AGGGAGACTG GACACAGAGG AGGACGCTCA AGCCCACTGG CCTCAGGACA 300
GATATCTGCT GGGGGAAGGG ACAGAGATAA CAACTGCTGT TTCATGCAGC CCAAACAAAT 360
CTGGGGACAC CCATACAAAA GTCAAGAAAA CCCTCCAGGT TCCATTGGAG CCCCCTGAAA 420
AAATACCCGG GTAATTTTCG ACAGAAGCTA AAGGGCTCTG TGGGGCTACT GGGGAAATTA 480
TTCCTAGGAA GTCTGGAAAA CCCTGTGATG GTAACAGAAT TTTAAGAGCA ACCTCAAATG 540
TACACTCAGA AGAAGTAGGT GTTTCAAGGG GGAGCCCCTG AGACACTTCT ACTTAATTTT 600
GGGACCCGAA TGAGATTACT AAAAATTTCC ACATTTGGGG TTTCTAATGG GGTTTCCCTA 660
AGAAAACCAC AGAACTGCCA CTATCTGCAA AGGGAGCTGA GGTGCTTCAA CTAAGCATAC 720
ATCCATCTGA AGAAGCCACA TTAGGCAATA AGAGATCTAC AGAAACTCAG ACCACTGAGC 780
CATACAGCTT AAGAAAGGCC AAGTTATGTT TTCTCCCCCA ACACAGTTCA TTGCTCCCAA 840
CAATTACGTT TCTATCAGGC TAAGGGATTT CTTCAGGGAC AGCAATCCCA AAGTGGCAAG 900
GCCCACCTGG GTCCCTTCCC ACATTCCCAT TGGAAAGCAC CAGAAACACT TGTGTCCCTT 960
CGGGGAAGGT CATGTATACA ACATTCCAGG AAAGTATCAC AGGGACTTTG TTTCTCAAGG 1020
AGAAACTCTA GGGGGAAGAG TCAGTTCTCT GAGGGAAGCT GCCCATTCAT TAAAGGGTTT 1080
CCACCCTACA ATTATGGCAG GAGAAGGGCT TTTGTGCTAG ATCCTTTACT CGAGTCAAGC 1140
TATGGCAGCT GGCTATCATT ATTCCATTTT ACAGGCGGGA GAGACAGATG GACAAGACAG 1200
CCGAACAGGT TCAGCATTTC ATCAGGTGAC TCCAGGCAGG CAGTAATCTG GCTAAGGGTC 1260
TACACTTTCA GTCCTTGAAG CATCACTCCA CCACTAAGTA GAGATACCTG GGGCAGGCCA 1320
CCTTCTCCCC ACACGCACAC CACTGTCATC TATTGGCAGG GCCTGAGAGG GTTTTAACAA 1380
TGAAAAAATT 1390