Tag | Content |
---|
EnhancerAtlas ID | HS060-21219 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr20:290650-291520 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr20:290776-290794 | CCTTCTCCCCTTCCTTCC | - | 6.65 | EWSR1-FLI1 | MA0149.1 | chr20:290788-290806 | CCTTCCTTCCCTCCCTCT | - | 6.94 | EWSR1-FLI1 | MA0149.1 | chr20:290780-290798 | CTCCCCTTCCTTCCTTCC | - | 7.43 | EWSR1-FLI1 | MA0149.1 | chr20:290784-290802 | CCTTCCTTCCTTCCCTCC | - | 9.47 | KLF16 | MA0741.1 | chr20:291228-291239 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr20:291228-291238 | GCCCCGCCCC | + | 6.02 | RFX1 | MA0509.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 6.63 | RFX1 | MA0509.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 6.66 | RFX2 | MA0600.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 7.13 | RFX2 | MA0600.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 7.14 | RFX5 | MA0510.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 7.08 | RFX5 | MA0510.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 7.21 | SP1 | MA0079.4 | chr20:291225-291240 | GAGGCCCCGCCCCCC | + | 6.52 | SP3 | MA0746.2 | chr20:291227-291240 | GGCCCCGCCCCCC | + | 6.11 | SP4 | MA0685.1 | chr20:291225-291242 | GAGGCCCCGCCCCCCAG | + | 6.04 | ZNF263 | MA0528.1 | chr20:290776-290797 | CCTTCTCCCCTTCCTTCCTTC | - | 6.6 | ZNF263 | MA0528.1 | chr20:290766-290787 | CCCTCCCTCCCCTTCTCCCCT | - | 6.81 | ZNF263 | MA0528.1 | chr20:290784-290805 | CCTTCCTTCCTTCCCTCCCTC | - | 7.27 | ZNF263 | MA0528.1 | chr20:290772-290793 | CTCCCCTTCTCCCCTTCCTTC | - | 7.35 | ZNF263 | MA0528.1 | chr20:290793-290814 | CTTCCCTCCCTCTCTTCCTCC | - | 7.59 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_04571 | chr20:289111-292182 | Brain_Anterior_Caudate | SE_05672 | chr20:288550-292373 | Brain_Cingulate_Gyrus | SE_06604 | chr20:288859-292008 | Brain_Hippocampus_Middle | SE_07456 | chr20:288751-292193 | Brain_Hippocampus_Middle_150 | SE_08506 | chr20:288447-292351 | Brain_Inferior_Temporal_Lobe | SE_29860 | chr20:289076-292911 | Fetal_Muscle | SE_54219 | chr20:289529-291501 | Spleen | SE_64903 | chr20:288518-291179 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I000307 | chr20 | 288611 | 292808 |
|
Enhancer Sequence | CCTCCAAGCC CCCAAATCCA AGTCTGTTAT ATCCCGTCAG CTCTGCGGGC CTGCCTGTGA 60 CTTTCAGCCC AAGGGGGCGG GCACTTCGTG TCACGCCACG TTGTCCACAT CATCGACCCT 120 CCCTCCCCTT CTCCCCTTCC TTCCTTCCCT CCCTCTCTTC CTCCCATTGA GTGCCAGTTC 180 TGTGCCAAGC TTTGCTGTTC AAAATGTTAC GAGTGGAGAA GTCAGGGAAG GATGGAATTA 240 TAGGTGTTTC TTCTTCATAC CTTTCTGTTT GGCTGATTTT TTTTCAAATG AGCACGCAGG 300 CCCGGTTCCT CAAACCCACT TCCAATGTGG CATTGCTGGG TTGGTTTGGT CCAAGGAAAG 360 CCCTGTCTCC TTAACTCCCA GCCCCCACGC CTCCTCCGCC GGCCCCCAAA TCCAGGCCGC 420 CCTGCCCCCT CCGGAAAGGG GAGTTGGGGG CGAGCGCCGA AATCTGAGTG GCTCTTTCAA 480 GCCTCCGTTG CCATAGAAAC CGGCCGCACA GGCCGATGCT GTCCATTACA CCATCCTCTA 540 GCCTCGCAGC CAATGGACTC CGAGCTCCAT CGCCAGAGGC CCCGCCCCCC AGCTCTGGGG 600 AGTCCACCAA TCAGCAGGTC CCGTGACTTA GAGCCCTGCC CTCGGCCCAG GGACACCACC 660 AATGCGCTTC GACCCTGCCC TCCTTCTCTT CGGTGTAACA AGAAGACTCG ATATTTTTTT 720 TTTTTTTTTT AGGAATTCTC CAGATCAGAA GGAATTGGCA GTAAGGCCTC TGTCAGCTGC 780 ACCCTGAATA ATCTTTGGCT GCTATTTTAT TTAAGGAGAG CAAAACTGTT TCAATTACGC 840 AACAATATAT ACCATTCTCT ACTAAAACAA 870
|