| Tag | Content |
|---|
EnhancerAtlas ID | HS060-18523 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr19:56619700-56620970 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Myod1 | MA0499.1 | chr19:56620816-56620829 | AGAGACAGCTGCA | - | 6.36 | | REST | MA0138.2 | chr19:56619998-56620019 | CCTAGCACCCAGGGCAGCGCC | + | 6.08 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_01218 | chr19:56618854-56620626 | Adrenal_Gland | | SE_23430 | chr19:56616631-56621015 | Colon_Crypt_1 | | SE_23834 | chr19:56616528-56620421 | Colon_Crypt_2 | | SE_23834 | chr19:56620531-56620944 | Colon_Crypt_2 | | SE_24810 | chr19:56616383-56620937 | Colon_Crypt_3 | | SE_30536 | chr19:56619664-56621055 | Fetal_Muscle | | SE_31642 | chr19:56616387-56621077 | Gastric | | SE_41593 | chr19:56616504-56621043 | LNCaP | | SE_42583 | chr19:56616608-56621126 | Lung | | SE_47517 | chr19:56619484-56620366 | Pancreas | | SE_47517 | chr19:56620505-56620895 | Pancreas | | SE_50656 | chr19:56619275-56621050 | Sigmoid_Colon | | SE_53594 | chr19:56617792-56621131 | Spleen | | SE_69016 | chr19:56619063-56620956 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I056104 | chr19 | 56616033 | 56626686 |
|
Enhancer Sequence | TCCCCGGCTC CCTCCACCCC GCCCCTGCCC AGCACTCCCT GGCTCCCTCC ACCCAACCCC 60
TGCCCAGAGC TCCCCAGCTC CCTCCACCCT GCCCCTGCCC AGAGCTCTCC TCCAGTCCTC 120
CCAGCTGCCT CCTCTGGACT CCAGGTGAGG GCCACCTCCT CAGGGTCCCC ACTTGCTCCA 180
CCTGCCTGCC TTTCTCTTCC TAACGCCTGC TACTCTGCCA CTCTCCGTGT CTCTGCTTAG 240
CTGGCCTGTC CTCCCGGCAC CCTGTCATGT CAGGGCCCGC TCTGACACCC ATGTGGTCCC 300
TAGCACCCAG GGCAGCGCCA GGCACAGCTG GGTGAGCACA CAAACAGGTA GGTCTGGACA 360
AAGCACAGGC TTAAGACCAG ACACAGCAAA TCCCAACACT CAGCCCCTCG CCGGACCTGT 420
CTCAGGAAGA GGTGAGACCC ACGCGGAAGG ACAGGCAGAC CTCCCCTCGG ACAGACCCCC 480
GTGGGCTCTG GGTGCCTCGG ATGGAAGAGT TCAGGCTAAA CTGCCATGAA CATGCTTGCA 540
GCCCGACCAG GCTAGCTCTA CCTCTCCAGA GGCTACCGAC AGGAAAGCCC AAATCTCAGG 600
AAATGCTTCT TGCAGAGACA GCCTCCATCA CAGTGAGGTT CCGAATGGGG AAACCGGGAG 660
GAACTCAAGA GACCCACGCC GGGGAGGTGG GTGGAGTCAC CCCTCCTCCA CGGGAGCAAG 720
GGAGCCGGCC AAGGAATGAC GGCTGGCACC CCTCCCACGC CCAACATCAA GAGTGAGAGT 780
GATCTCAACG TTTTTCTTAT GTTCATTTTC CTAATATTTT AATAACAGGT AATTACGTCT 840
GTATTAAGGG AAAAAGCCTA AAGGGGTGTC TTGGACAGCG GCTGGGGCTA CGTATCGGAA 900
CTGGTAGATG GCTGGGTGCT GGGGGCCAGC AGTGAAGGCG ACGGCACAGA ACAGGCCACC 960
CCAGTGCAGC CCCAAAGGCA CGGGGGCAGC AGCAGATGCG AGAAGGGTGC TCTAGCCTCC 1020
CCTTTCTTCC TGCAAGCAGA TGAAACCCCA CGTGAAACAC GCCCTCCTCG TAGAGGAAGA 1080
GGACGTGCTC ATCACCAGCA CCGGGAGCTG AGGCTGAGAG ACAGCTGCAC ACACCAACCC 1140
TTATCTCCCT CAGCCTCCCC AAGGATTTTA GTTACTTTTT CACAGTTGCT ATTCTTGGGC 1200
ATAGAAGCCC TCAGGTCTAA CTGCTTCAGG AGGCCTTCAC TTTCTGAAGT CTCCCATGTA 1260
CCTGTAAAAA 1270
|
