EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS060-18256

Organism

Homo sapiens

Tissue/cell

GM12891

Coordinate

chr19:49734500-49735640

Target genes

Number: 23
Name	Ensembl ID

RPL18	ENSG00000063177
BCAT2	ENSG00000105552
AC011450.1	ENSG00000197813
PIH1D1	ENSG00000104872
ALDH16A1	ENSG00000161618
RPL13A	ENSG00000142541
SNORD32A	ENSG00000201675
SNORD33	ENSG00000199631
SNORD35A	ENSG00000200259
RPS11	ENSG00000142534
SNORD35B	ENSG00000200530
FCGRT	ENSG00000104870
RCN3	ENSG00000142552
Y	ENSG00000207073
NOSIP	ENSG00000142546
PRR12	ENSG00000126464
RRAS	ENSG00000126458
SCAF1	ENSG00000126461
BCL2L12	ENSG00000126453
IRF3	ENSG00000126456
PRMT1	ENSG00000126457
AP2A1	ENSG00000196961
MED25	ENSG00000104973

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HES2	MA0616.2	chr19:49734642-49734652	GGCACGTGCC	+	6.02
HES2	MA0616.2	chr19:49734642-49734652	GGCACGTGCC	-	6.02
NFKB1	MA0105.4	chr19:49735333-49735346	AGGGGATTCCCCC	-	6.78
NFKB1	MA0105.4	chr19:49735333-49735346	AGGGGATTCCCCC	+	6.92
NKX2-5	MA0063.2	chr19:49735613-49735623	CTCAAGTGGT	-	6.02
ZNF263	MA0528.1	chr19:49735224-49735245	GGAGGATGCAGGGGGAAAGAA	+	6

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 3
Chromosome	Start	End

chr19	49734647	49734800
chr19	49734800	49735200
chr19	49735224	49735351

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I049231

chr19

49734441

49735121

Enhancer Sequence

GCCTGTTTTA GTTTTGTTGA GACAGTGTCT CGCTCTGTTG CTCAGGCTGG AGTGCAGTGG 60
CATGACCTCG GCTCACTGCA GCCTCCACCT CCCAGGCTCA AGCGATCCTC TCACCTCAGC 120
CTCCCAAGTA TCTGGGATTA CAGGCACGTG CCACCATGCC TGGCTAATTT TTGTATTTTT 180
TGGTATAGAT GGGGTTTCAC CATATTGGCC AGGCTGGTCT TGAACGCCTG ACTGCAAGTG 240
GTCCTCCTGC CTCGGCCTCC CAAAGTGCTG TGATTACAGG CGTGAGCCAC CACACCCGGC 300
GATACTTTTG TTTTGACAGG TCACTGACCT AGTTTGGTTC AGCTCAGGGC TTCTGAGCAG 360
CCTGCTGTGG GTTGTGGTTT CAGGTGAGTT CTGACTTCAA AGTCGTTACA ATGACTTTCT 420
AATCTGTCTT CCCCATGGAC CACCCACTGG CCAGACTGGA ACCCAGATGG TGTTGAATCC 480
CTTCATTGTG TCTTCAACAT CTTTGGAATG TTGTTTAGGC TCAGATCCAC ATGCATCTTA 540
GGGGCAAACA GAGAAATTCA TGAAAGCAAC TTCATTAGGT CACTTTCCCA ATCTCCTCCC 600
TCTCCGCGGT ACTTTCTGGT TTCTCTCCCC TTTGTTGGTC CTCCAGCCAG AAAGCTGGGG 660
CCTCAGCTAC CCCACTTGCC TCACACTTCC TGTGATTGAA CCTGCATCTA CAGCGAAGTG 720
GGCAGGAGGA TGCAGGGGGA AAGAAAGCAA TGGGGATGGG TGCTGTCCCC GGGGGACCAC 780
AGAGCCTTGA TCAGGGAGGA GAGAACAGAG AAAGAAACAG AAAAAGGGGA AACAGGGGAT 840
TCCCCCACCC TCTGATCATT AAAAGGCATT CATTCATTCA TTCATTCATT CATTCATTCG 900
AGATGGAGTC TCACTCTGTC GCCCAGGTTG GAGTGCAGTG GCGCGATCTC GGCTCACTGC 960
AACCCCCGCC TCCTGGGTTC AAGTGATTCT CCCACGTCAG CTTCCCAAGT AGCTGGGATG 1020
AAAGGCATCA ACCACCAGGC CTGGCTAATT TTTGTATTTT TTGGTAGAGA CGGGGTTTCA 1080
CCATGTTGGC CAGGCTGGTC TTAAACTCCT GACCTCAAGT GGTCCACCAA CCTTGGCGTC 1140