| Tag | Content |
|---|
EnhancerAtlas ID | HS060-18229 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr19:49360750-49362110 |
Target genes | | Number: 36 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:49361189-49361210 | AAAAAAAAAAAGAAACTGGCA | - | 6.16 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_11592 | chr19:49361573-49363222 | CD20 | | SE_13446 | chr19:49361928-49364201 | CD34_Primary_RO01536 | | SE_18664 | chr19:49361795-49363520 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19244 | chr19:49361851-49363223 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_37651 | chr19:49360150-49361940 | HSMMtube | | SE_59232 | chr19:49361792-49396070 | Ly3 | | SE_65554 | chr19:49361651-49363323 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 49361206 | 49361349 | | chr19 | 49361354 | 49361709 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH19I048856 | chr19 | 49360151 | 49361940 | | GH19I048858 | chr19 | 49361961 | 49364097 |
|
Enhancer Sequence | TGCCTGGGAG GAACGTTGAA ATGGAGATGT TTAGAAACTG GCATGTCTGG GAGACTTTTC 60
ATTTTGTTCT GTACTAAGAA AAATTCTTCT GCCTTGGGAT CCTGTTGATC TATGACCTTA 120
CCCCCAACCC TGTGCTCTCT GAAACATGTG CTGTGTCCAC TCAGGGTTAA ATGGATTAAG 180
GGCAGTGCAA GATGTGCTTT GTTAAACAGA TGCTTGAAGG CAGCATGCTC GTTAAGAGTC 240
ATCACCACTC CCTAATCTCA AGTACCCAGG GACACAAACA CTGCGGAAGG CCGCAGGGTC 300
CTCTGCCTAG GAAAACCAGA GACCTTTGTT CACTTGTTTA TCTGCTGACC TTCCCTCCAC 360
TATTGTCCTA TGACCCTGCC AAATCCCCCT CTGCGAGAAA CACCCAAGAA TGATCAATAA 420
AAAAATAATA ATAATAATTA AAAAAAAAAA GAAACTGGCA TGTCTTAGTG ACAAATAGTA 480
GAGTGGGCAT GTCCATAATT GAAGTGCTTT AGGAGATATT TTGAGGTTCA GAACTGGGCC 540
CTCTCAACTT CCTCAACTAC CTGCTCTCCA GCTGTGTGCC ACTGTGGGGA CACAGAGGGT 600
GATAATAAAT GCACCAGCCT GGCAAAACAG CCCCACAAGA TGATGGAATT TGCTACTCTC 660
ATTCTCAGAC TTGCAGTCAG CTGTGGATAT TCTGAGCTAC CGTCCCATGA TGCTCAGACA 720
AAACAGCAGG CAACCAACTT GCAAGGTGAA CTGGGGACAC AAGGGAGATG CAAACCTCTC 780
ACCGCACTGT CTTGGCACAG AGTATCCAGG ACTACAATCC CCATGATGCT TAAAGAGCAA 840
TGGCTGGGCC AGGCGCGGTG GCTCACGCCT GTAATCCCAG CACTTTGGGA GGCTGAGATG 900
GGCAGATCAC CTGTCAGCTG GTCAGGAGTT CGAGACCAGC TTGGTCAACA TGGTGAAACC 960
TCATCTCTAC CAAAAATATA AAAATCAGCC GGACGTGGTG GCAGGTGCCT GTAATCCTAG 1020
CTACTCGGGA GGCTGAGGCA GGAGAATCGC TTGAACCCGG GAGACAGAGG TTGTAGTGAG 1080
CCGAGATCGT GCCACTGCCC TCTAACCTTG GCGACAGAGC AAGACCTCAG TCTCAAAAAA 1140
AAAAAAAAAA AGCAATGGCC GAAGACCAGC CTAGAAAGAC AGCCCAGACA CCTGAGAGGA 1200
GCTGGACACC TGATAGGTTC AAGCTCTCTC TCACCTGAGC CCAGCTGAGA TCATTATGGA 1260
CTACAATACC CATGACACCC AGGGAGCAAT GGCCTTGAGA ATACGGAAAG ACAGCCCTGA 1320
GGCCTGATGG GAAACGTAGT CCCCTCCTTC TCACCTCTCT 1360
|
