Tag | Content |
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EnhancerAtlas ID | HS060-17666 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr19:30156410-30157600 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NR2C2 | MA0504.1 | chr19:30157189-30157204 | GAGGGTCAGAGGCCA | + | 6.06 | ZIC3 | MA0697.1 | chr19:30156864-30156879 | GCGCGGCGGGGGGCG | - | 6.04 |
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| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_00321 | chr19:30155636-30159625 | Adipose_Nuclei | SE_01995 | chr19:30153017-30159583 | Aorta | SE_03500 | chr19:30157266-30158470 | Brain_Angular_Gyrus | SE_04418 | chr19:30156057-30159537 | Brain_Anterior_Caudate | SE_05104 | chr19:30154783-30160666 | Brain_Cingulate_Gyrus | SE_05992 | chr19:30152855-30161032 | Brain_Hippocampus_Middle | SE_07189 | chr19:30155425-30159350 | Brain_Hippocampus_Middle_150 | SE_08055 | chr19:30156554-30159709 | Brain_Inferior_Temporal_Lobe | SE_12389 | chr19:30156386-30160510 | CD3 | SE_15294 | chr19:30155212-30160829 | CD4_Memory_Primary_7pool | SE_16572 | chr19:30156023-30160554 | CD4_Naive_Primary_8pool | SE_18169 | chr19:30155285-30168956 | CD4p_CD25-_CD45ROp_Memory | SE_19560 | chr19:30155267-30160875 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20556 | chr19:30155335-30172521 | CD56 | SE_21321 | chr19:30155348-30159932 | CD8_Memory_7pool | SE_40973 | chr19:30152831-30160857 | Left_Ventricle | SE_41671 | chr19:30155832-30159316 | LNCaP | SE_42924 | chr19:30152535-30160773 | Lung | SE_48180 | chr19:30153054-30174554 | Psoas_Muscle | SE_48808 | chr19:30153021-30159496 | Right_Atrium | SE_49565 | chr19:30155834-30159357 | Right_Ventricle | SE_51595 | chr19:30152738-30160610 | Skeletal_Muscle | SE_55264 | chr19:30155857-30159627 | Thymus | SE_56727 | chr19:30156358-30156676 | VACO_400 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | AGGTGAGTCC CCCCACCGTC CCCCGGCCGG GCTGCGGGTC GCGGGGCAGG CGCATGAGGC 60 GAGTCTCCCA TCACCACCCC CGGACAAGCG AGCTCTCTCC CGCCGCGCGG TCTTGGCGGC 120 TCCTGGGCCG GCGGGGCGCA GTGCCGCTGA CTCCAGCCCA AGAAGAGGCC TGGGAAGGGC 180 GCTCCTGGGC GGCTTGCGGG GTGAACCTGC AGGGAGCCTG GGGAGAGCGG TCAGGGGTCA 240 GAGCGTCCGA GGCGGAATCC CCGGGGAAAC GCGCAGATGT AAGCTGGTGG AGGTAAGGGG 300 GTCGCGGGCC ACCCGGGACT GCAGGGGTCT CAGCGCACCC GGTCGCTGGT GGTGTTTCCG 360 GGATCCTGGC CTCGTGTGGC CGCCGGGACC TCTCTTCTCA GCCCCAGTCT GCAGTCTGGA 420 GGCCTGGATG GGACCACTGT CCCCCTGGGC AGGGGCGCGG CGGGGGGCGC TGGGGTCCCA 480 GTTCCTCTGG AGCAGTTGAG TTTGTGATTC TTGGTGGGAG CTGCCAAGGG AAACAGGGTC 540 GGGCACTGCT CCCATCTCAG AGAGGAAACT ATTGAGCAGG CCCGCAGAGA GAGGCGGCCT 600 GGAATCTCCC TCCTTTCTCG TTTCCCCAAC ACCTGGCGGG CCGTGTAGGG CAGAGGTGTG 660 GTCAGCCTCT TTGCAGGTGG GAAAGCAGAG AGGTTCCGAG CCACGCTGAA ACTTGATCTC 720 TGCAGCCCAA GGGGAGCACT CCTTTGGAAT TTGAACACCT CTGGTATCTC CTGGCCAGAG 780 AGGGTCAGAG GCCAAGGAGG TGGGGAGGTA GTCCCCTAAT GCGCTGGGAT CGTCCCTCTG 840 CACAGCGTCG TTCCCACTGG AGTCTGTTGT GAGCTGAGAT GACTCTCTGA CTTCGGCCTG 900 CGTCCCTGCA CACGTCAGCC CTCCGGGCTG CCAAAACACA GGCCAGGCAG CCCTGGGTGA 960 ACTAGGGGAC CTGCCCAACC CAGCCCACCC CGAGGAAGGA AGGGGGATTG GCCAGTGTGG 1020 CCTGGAGGGT GGGACAGCCC AGCCAAGCTG ACGGACCTGC TCGGGATGGG GTGGGCATCA 1080 GGCATTTGGA GCGCAGGCAA CACCCGCTGG ACTCTGACTT CTGGAGTTCT GATTTGGTCT 1140 CTGGTTGAGT GCAGCTTTCC ACAGCTCATG GTTATTTTGG AGCCGAGCTT 1190
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