| Tag | Content |
|---|
EnhancerAtlas ID | HS060-17535 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr19:18590320-18591710 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SOX10 | MA0442.2 | chr19:18591169-18591180 | AAAACAAAGGA | + | 6.32 | | Sox3 | MA0514.1 | chr19:18591169-18591179 | AAAACAAAGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 30 | ID | Coordinate | Tissue/cell |
| SE_01013 | chr19:18590470-18592196 | Adrenal_Gland | | SE_04099 | chr19:18590344-18591643 | Brain_Anterior_Caudate | | SE_06012 | chr19:18587569-18592062 | Brain_Hippocampus_Middle | | SE_08139 | chr19:18590405-18591646 | Brain_Inferior_Temporal_Lobe | | SE_09318 | chr19:18587289-18593113 | CD14 | | SE_12155 | chr19:18590474-18591063 | CD3 | | SE_15037 | chr19:18589123-18590617 | CD4_Memory_Primary_7pool | | SE_17983 | chr19:18583928-18591813 | CD4p_CD25-_CD45ROp_Memory | | SE_19379 | chr19:18590449-18593306 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20439 | chr19:18584612-18591598 | CD56 | | SE_21047 | chr19:18588603-18591663 | CD8_Memory_7pool | | SE_22689 | chr19:18583973-18591671 | CD8_primiary | | SE_23216 | chr19:18590556-18591559 | Colon_Crypt_1 | | SE_23893 | chr19:18590542-18590954 | Colon_Crypt_2 | | SE_23893 | chr19:18591073-18591477 | Colon_Crypt_2 | | SE_26168 | chr19:18588425-18592741 | Duodenum_Smooth_Muscle | | SE_26932 | chr19:18588122-18592042 | Esophagus | | SE_31681 | chr19:18590369-18592244 | Gastric | | SE_41123 | chr19:18590510-18591609 | Left_Ventricle | | SE_41560 | chr19:18590567-18591450 | LNCaP | | SE_42344 | chr19:18590412-18592352 | Lung | | SE_44495 | chr19:18587274-18592340 | NHDF-Ad | | SE_46271 | chr19:18587413-18593123 | Osteoblasts | | SE_47511 | chr19:18590495-18591608 | Pancreas | | SE_48120 | chr19:18587362-18592202 | Psoas_Muscle | | SE_48694 | chr19:18590432-18591600 | Right_Atrium | | SE_50125 | chr19:18585873-18593035 | Sigmoid_Colon | | SE_51145 | chr19:18587336-18592595 | Skeletal_Muscle | | SE_52434 | chr19:18585882-18592848 | Small_Intestine | | SE_53541 | chr19:18587934-18592552 | Spleen |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I018472 | chr19 | 18583787 | 18592442 |
|
Enhancer Sequence | CCAGCCTGAC CAACATGGTG AAACTCCATC TCTACTAAAA ATACAAAAAT TAGCCAGGCA 60
TGGTGGCATA CGCCTATAAT CCTAGCTACT CGGGAGCCTG AGGCAGGAGA ACTGCTTGAA 120
CCCGGTAGGC GGAGGTTGCA GTGAGCTGAG ATCAAGCCAC TGCACTCCAG CCTGCACGAC 180
AGAGTGAGAC TCCATCTCAA AAAAAAAAAA AAAAAAAAAT CTAGGATTGT TTTAAAAACT 240
CTCCAGCAAA GACAGAAACT AGGGAGAGGG CACAGTGAAG AGATGAGACA CACAGACAGA 300
TGGACGGGGC CCAATCTGGC CAGGTCCCAG GATACCTGCT ACCAGCCTGG GGACAATGAG 360
GCCCAAGGCA GCAGGTGCCA AGGCTGCCCC AAAGACACAT GATCCTTCCC ACCACCCTCC 420
AGAAGCACCC ACTCAGCAGA AGTGCCCACT CTCCCCAGGC AGCACGTTCT CCCTGCTGTC 480
TACTGGGCAA GGCCTGCCAC CCCACCCCTG ATGCAGGAAA TGACAGAAAG GAATGCATCT 540
GTTCCTTCTT CAGAAGTCCA TCTTGCTGAC TCTCCCAAGC ACCAGTGTCA GCACACACGT 600
CCTGATCTTA CAGAGCTGGG TCACCCTGCC AAGCCACGGC GTGTGGTCCA GCAGAGGGAA 660
GGTGAAGTCC CGGGAAGAGC CCTGGACGGT GGCCTCCCCA CAACAGGCCC CCCCTTTCCA 720
GTAAAGCACA AATGATTGGG AAACGCTATT CAGGAATCCT CCTTGAGACT TCCTGGCAGG 780
ACTGGAGCAG GACATTGAGG CCACGGAGAG TTTAGACAGT GACTGAGTGG GGCTGTCTCC 840
GTGAACTACA AAACAAAGGA AGATCTGCCC AGTGAGCTTG GTTGGCTCAG GGACGAGCTA 900
GGGAACTTGG ACAGACACAT TGTGGACCTC ACTGGTTCCA GCCTAGGGAA CCAGGTGGCC 960
ACGGTCAGGG CAGAGCAGAG GGCAGGACCC ACGGCAGCTC CTCTGCCAGC CTGGGAGGAC 1020
AGATGGTGTG TTCAGCAGGC CAGGTGGGCC TGTAAGAGCA GGAAAGGGAC TCCAACTGGC 1080
TACAAGCCAA GTGTAATTCA GTGGCCGGCA TAGCAAGTAT TTTTTTTCTT TCTTTCTTTT 1140
TGGAGATAAG CTCTCACTCT GTCACCCAGG CTGGAGTGCG GTGGTGTGAA CACGGCTCAC 1200
TGCAGCTTCG ACCTTCTAGG CTCAGGTGAT CCTCCTGCCT CAGCTCCCGA GTAGCTGGGA 1260
CCACAGGCAC ACACCAACAC ACCTGGCTAA TTTTTCTATT TTCTGTAGAG ATAGGGTTTT 1320
GCCATGTTGC CCAGGCTGGA CTTGAACTCC TAGGTTCAAG CAACTCGACA GACTCAGCCT 1380
CCCAAAGTGC 1390
|
