Tag | Content |
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EnhancerAtlas ID | HS060-17498 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr19:18131820-18133900 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | + | 6.44 | MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | - | 6.44 | Nr2f6(var.2) | MA0728.1 | chr19:18133768-18133783 | TGAACTCCTGACCTC | - | 6.22 | RREB1 | MA0073.1 | chr19:18132340-18132360 | CACCCCCCCACCCCCCACCT | + | 6.22 | SP3 | MA0746.2 | chr19:18133699-18133712 | CACCACGCCCACC | + | 6.48 | SP8 | MA0747.1 | chr19:18133700-18133712 | ACCACGCCCACC | + | 6.32 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18131311-18133631 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18130664-18133651 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18130441-18133652 | Right_Atrium | SE_50498 | chr19:18130482-18133715 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18131327-18132959 | Thymus | SE_55387 | chr19:18132966-18133608 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18130282-18133763 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 18133045 | 18133309 | chr19 | 18131991 | 18132570 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
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Enhancer Sequence | GCTCATCCAT GTGGATCCAC AGTTCTGACC ACCCCACCTC TGCCTCACCC TGCCTCCGCC 60 ACCCCTGCAC CCTAATGCAG CAGGATTTCC CAAGCCCCCC TGCCTTGGCC CAGGGAGTTA 120 TCTCCACCAG ATCCACCTTT CTGAGCGAGG AGCTGGGTGC ATTGAGGGGC AGGGGCGGCT 180 GGAGTTCAGA TGCACCTTTT GAGCGAGGGG CTGGGCCTCT CTGTCGCTGG GCTCCAGGCA 240 CAGGGCAGTC ATGATGTACA CACACACGTG CAAACACACA CGCACACACA TAAGCCTGTC 300 AGCAACATAG AAACACCAGC CAGTGAACTC GGGCACAAGC AGCCGGGCAC AGAGTGTTCA 360 CCAGGTGCTC ACATGTGGAG TACCCCAACT CCTAGGAGGA TGCGGTTATG GCCTGGATCC 420 TACAGGTGGG GCCCAGACAT GGGCTTTGAA CCCACGCCAG GGTATGCACA AACCTATCCA 480 AACACACGCG TGTCTGCCCT AGCTTCCCTC ACCCGGGAGT CACCCCCCCA CCCCCCACCT 540 TGTTTTTGAT GTTCAGGAAA GTCCCCAGAA AGCACTGGGC CCGGGCAAGG GGCCAGGAGG 600 AAATGGTGAC TCAGCCGGTG GCCATCAGTG CCTGCCACGC TGGGCTGGGT GGACTGCGCG 660 GCCCGATCTG GGAGGATCCA CAGAAAACAA CAATAAAAGA TGAGGGCGTG GGTGCGGGGT 720 AAAAAGGACT CAGCCCAAGA ATGATCAGAG AGGGGATGGA TCCCCCTGTG CTCCAACACT 780 TCAACCCTGC TGGGCCTGAT TGACAAGTGG GGAAACTGAG ACACAGGGAA CAAGTGACTT 840 CGCCAAGGCC CACCAGCCAA GATGGTACAG GCAAGGGGAT CCCTAAGTCC TTAACACAGG 900 GGTCTGGAGG AATGTCTACC TGCCCTGCCC TTTTTTTTTT TTTTTTTTTT GGAGACAGGG 960 TCTCACTCTG TCCGTCAGGC TGGAATGCAG TGGCATGATC TCAGCTGACT GCAATCTCCG 1020 CCTCCTGCCT CAGCCTCCCA AGTAGCTGGG ATTACCGGCG CCTGTCCCTA TGCCCAGGTA 1080 ATTTTTGTAT TTTTAGTAGA GATGGGGTTT CACCATGTTG GCCAGGCTGG TCTCAAACTC 1140 CTGACCTCAG GTGATCTGCC CACCTCGGCC TGCCAAAGTG CTGGGATTAC AGGCGTGAGC 1200 CACAGTGCCC GGCTCCCTGC CCCACTTTCT GAGACCCAGA TCCACTTCCT GGTTTCCTGT 1260 GTGGTCATGT GACCACACTT GGCCAATTGG AGCCTTTTGT TATCACAGGC ACAGGGATTG 1320 GGTCAGGGCT GGGCACGTGA TCCTGCCTGA GCCAATCATG CTACGAGTTT GGAGACTCCC 1380 TGGAAGAAGG CCTAGAAGTA AGGAAAACCA TCTTGGACGC ATGATGATGG CAGTGGATCA 1440 GAGTCCCAAG GACACTGGTG AAGATCAGAG CAGGACTCAC ACAACCTCAG ATCCCTGTGG 1500 AGTCAGGGTG GAACCAGAGG GAAGGCTGAA GGCTGGAGGG TCCTGAGAGG CCTTGCAGAA 1560 AGAGAGGACA TTGGAGCTGG GGCTTTGATG GATGAAGAGG AACTAGGGAA AGGCATTTCA 1620 AGCAGAGGGA ACAGCCTGTG CAACCACAGC AGGCAGGTGG GAGCTAGGCG TGTCCTCAGC 1680 CACCCCAGTG GCCCCATGGG GCTGGAGCAT AGAGAGGCAT CTGCAAATGT GTTTATTTGT 1740 TTATTGAGAC GGAGTTTTGC TCTTGTTGCC CAGGCTGGAG TGCAGTGGCG CAATCTTGGC 1800 TCACTGCAAC CTCCGCCTCC CGGGTTCAAG CGATTCTCCT GTCTCAGTCT CCTGAGTAGC 1860 TGGGATTACA GGCGCACGCC ACCACGCCCA CCTAATTTTT TGTATTTTTA GTAGAGACGG 1920 GGTTTCACCA TGTTGGCCAA GCTGATCTTG AACTCCTGAC CTCAGGTGAT CCACCCGCCT 1980 TGGCCTCCCA AAGTGCTGGG ATTACAGGCG TGAGCCACTG CGCGTGACTA TTTATTTATT 2040 TTTTTAGATG GAGTCTCACT CTATTGCCCA GGCTAGAGTG 2080
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