EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS060-16608

Organism

Homo sapiens

Tissue/cell

GM12891

Coordinate

chr19:2490660-2492220

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr19:2491952-2491973

TCTTTCTTTCTTTTTTTTTTT

6.25

dbSUPER

Number of super-enhancer constituents: 12
ID	Coordinate	Tissue/cell

SE_24383	chr19:2490669-2491268	Colon_Crypt_2
SE_24383	chr19:2491287-2491968	Colon_Crypt_2
SE_25170	chr19:2490646-2491955	Colon_Crypt_3
SE_27369	chr19:2490633-2492097	Esophagus
SE_31940	chr19:2490678-2492023	Gastric
SE_37152	chr19:2490278-2499382	HSMMtube
SE_41828	chr19:2490655-2491964	LNCaP
SE_43297	chr19:2490649-2491929	Lung
SE_44558	chr19:2490659-2492087	NHDF-Ad
SE_48020	chr19:2490938-2491828	Pancreas
SE_50943	chr19:2490599-2491991	Sigmoid_Colon
SE_54295	chr19:2490687-2492105	Spleen

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I002490

chr19

2490659

2497696

Enhancer Sequence

AACTCCTGAC CTCAGGTGAT CTGCCTGTCT CAGCCTCCCA AACTGCTGGG ATTACAGGCA 60
TGTGAGCCAT GGTGCCCGGC ACAAACAGCC TTGTCCATGC AAGCACAAGC ACCCACATGT 120
GTCTAAGACC CTGGTGTGCA CACCTGCACT CTGACCTGCA CTGCGTGTTC CCACTAGGGA 180
AATGCAAATA TTTCTAAGCT CCAATGCTCA CTCCACAGAG CCCCGAGGCC TGTGAATACC 240
CGCGGTATAC AGAGATCCAT GAGGTGCCAG TACTCAAACT GTGGAAGCCT GCACGTGCTG 300
ATTTGGGGTG GGAGTAGAGT GCAGGGAACT CATCTGTGTG CAGCCCCTTT CTCTGGGCCC 360
TTTGTGTGCA CCTCAGTTTA CCCCACCTGG GTAAGAGACT CTGCCCTGCT GGAGTCTCTT 420
CTGGTTCTGA CTTTGAAGGG CTCCAAGGTG TGGGGGGAAA GGGGGCTGCA TTCCCTCTCT 480
GCTGTGTGCC TCTGGGTGGT GGATTCAGGC TAGCAGGGCT GGGGGCTGGG CCTCCAGGCC 540
CTTCCCGGAA GCCCGGGAAG CAGGTGCAAG GGTAGGCAGT CTCCACGGGC AGGGCGCCAG 600
ACCTTGGCTT CCCTGAAACT GGGCACAGCA GCTGGGAGAG GTTTCCGGGC CCGCCTGGCC 660
CCACCTGGCC CCTGGCACTT TCGGAAGATG GGCGGGGCAG GCAGGCAATG CCAAGGACGG 720
GCGAGGCCCA GCCTGCACAA GAGTCGCCGG TGAACCTGTG CGCACACACG GGTGTGCATG 780
TATATGTGTG CACACGTGCA TGGGCCATGC TGATGTGAGT TCTGTACCCC ACCTACAAAC 840
GGGTGTGCTC ATGAACACGT GCAGGGTCAC CCTGGCACAT GAACCGTGCA GCACAGGCAA 900
TGGCCCAGCG GTAATTCACC CATAGCGGTG ACAGGAAAGA GATGCTTGTC TGCTTTGCTC 960
ACTGTGCGTC TCCAGCACCC CACAGCTGGT TGGCACTTGG TGAATATTTG CTGAGTGGAC 1020
AAATGAGTGA ATACACGAAC ACATCATTTT GCAAATATGT ACTGAATGTC TCTACTCTGC 1080
ATACCAGACA TTTGCACATC TTCAAACAAC AAAAAGATCC TGGGAAACGA CATTCTAGAC 1140
ATCCACGGGG TGGGAATAAG CCCACGCCTG AGAGTACACA CTCATGTCCA GGAAACACCT 1200
GAGTCCACTT TGATTTGTTC ACCTCCAGAA GCCAGAGCCT GGTGCCCACA CACAGGCCCT 1260
CATGCAGAGA CACGCATTTT CTTTCTTTTT TTTCTTTCTT TCTTTTTTTT TTTGAGATGG 1320
AGTTTTGCTC AGTTGCCCGG GCTGGAGTGC AGTGGCGCGA TCTCGGCCCA CTGCAAGCTC 1380
CGCCTCCCGG GCTCACGCCA CTCTCCTGCC TCAGCCTCCC GAGTAGCTGG GACTACAGGC 1440
GCCTGCCACC ACGCCTGGCT AATTTTTCAT ATTTTTTTAG TAGAGACGGG GTTTCACCTT 1500
GTTAGCCAGG ATGGTCTCGA TCTCCTGACC TTGTGATCTG CCCACCTCGG TCTCCCAAAG 1560