| Tag | Content |
|---|
EnhancerAtlas ID | HS060-14318 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr17:19187030-19188930 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NKX2-3 | MA0672.1 | chr17:19188264-19188274 | ACCACTTGAA | + | 6.02 | | Nkx3-2 | MA0122.3 | chr17:19187443-19187456 | ATTAAGTGTTTTT | - | 6.42 | | POU2F2 | MA0507.1 | chr17:19187556-19187569 | ACATGCAAATGAG | - | 6.54 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_03171 | chr17:19186900-19187801 | Brain_Angular_Gyrus | | SE_03171 | chr17:19187904-19188887 | Brain_Angular_Gyrus | | SE_03901 | chr17:19186639-19192395 | Brain_Anterior_Caudate | | SE_04799 | chr17:19183069-19192516 | Brain_Cingulate_Gyrus | | SE_05794 | chr17:19185887-19196436 | Brain_Hippocampus_Middle | | SE_06708 | chr17:19183223-19192395 | Brain_Hippocampus_Middle_150 | | SE_07739 | chr17:19183986-19192472 | Brain_Inferior_Temporal_Lobe | | SE_08905 | chr17:19188655-19188853 | Brain_Mid_Frontal_Lobe |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH17I019283 | chr17 | 19186901 | 19187801 | | GH17I019284 | chr17 | 19187905 | 19188887 |
|
Enhancer Sequence | AGTAATGGAA GTGCTTCTCA CCCTTTGCCA GAGCAGCAGC AATGGGTGAC AGGCAGGGTG 60
GGTGTCTCTG GGCTTAGGGA GTGGTGGCCA CTGCAGAGCT CGAACCTGTC CTCAGTACCC 120
AGCTTTTGGT GGCCCAGGCA AATTGTCCTT GGTCTGGATT GAGTTTTGGT TATAAAGGGA 180
CTTTTAGTCC CTTGGCTGCT CTGGTTCAGG GATCTCTAAC GCCCTTTGCT GCTCTGGGCC 240
TCATTCTGTA CATCTGGGCA GACGGTGGGC AGAGGCAGGT CTTTTCTGCT TCCTTGTCAG 300
AATGGGTCTG GCAGCAAAGG AGTTGTCCTG CTGCACATAC AATGGGGAGT TGACTCTGGT 360
AGCCAGGAGG AAACAAATGC TCTTTCTTGA TAATCTTGTT TCTTTAATCT CATATTAAGT 420
GTTTTTCTGC TGACTGAGCT TCAGGTCTCT TGAATGGCTC AGTATTATTC TACTTCAGCA 480
AAAAAACTTG TACAGGTTGC TAGTGTGAAC AAGGCCTCCC TGCCAAACAT GCAAATGAGA 540
GTTGCTAGTG ATCTGGTTGC ATGGCTGGGT CTGCATTGAG TTCTGGTTTT GCATGTTGGA 600
TTAATTTGGG TCTTTGCCTT ATGGTCAGAA GAGGTTTCAG GGAACAGAGT GGAGTTCAGG 660
GCCTGATGGA AGCTGGTCTC TGTGAGTCAC ATTGGCATCC TGGCTGTTCA TTGGAAGTGG 720
TCCCCCAACA GGTGTTTCTC CATTTTCACA GTGCTATTCC AGCCACAGTG TGGACCCCAC 780
ACTCAGAGAG ACAGGTGGCC CTAGTGGCCT TTGGGGGACA GGGTGAGGAT GGAGGTGGGG 840
ATTGTAGAAA TTATATCTTC TGGCTGCTAA AACAAAAGTG CAGATCCCTA GTAACACTAT 900
GTCAGCATAG CAGAAAACTT CTTTTTAAAG GAAGTTGTCT GTAGTTTGAC AGACCTCAGT 960
CAACCCTTAC TTAGTCAGTG TTCTGTTACC AGACCATTTA CTAACATTTC CTGCTTTTGC 1020
AGGTTTCGAT TTGACATTGT ACCGCCACCA CTAGCATTTT GAGAAATGTG TTAAATGAGA 1080
GATTTGCATA TTAAAGTCAG ATTTCCTGCT TCTAGGAATT CTGAATTATT ACCGAGCTTG 1140
GAGCAGGTTA ACATATTCTT GTCCCATATG TAGTTGTCAT TTTTCTTCTT AGTTTGAACT 1200
GTTTTGCTTA AGCAAAGGTT GTGACCTTGG TTAAACCACT TGAAAACAAT TTAACCTTAA 1260
TCTCCAGAAG CCTCAATGCA GGGTTAAATT GCACCAAAAC AAATGAAGAT TGCCCTTTAA 1320
GAAGTGAAAT TGTTTTATTT CTCTCAAGGA TCCTCTTACC AACCCCCAGA GAGGCTCTCT 1380
TTGGATTGAG TTGGTCCCAA CCTGCCTTGA CTTCCTCTGT CCCTGTGACT GTGGCTGTGG 1440
CTTTGATGCA GGCCAAGGGG AGCTGCCATT CTCTTTATGT GCTTTTCATG GTCATTATTC 1500
TCAAGAAGCC AGAGGATGCT AAGCAAGGAG CTGAAACAGC TTCATGTTCC ATGAACAATT 1560
TGTGGAACTT TGCAGATGCA GGGGTTGGAA CAGTGGGGAT GCAGGAGCCT GGTTTGATCC 1620
ACCCCTCCTC CTCATACCGA GTCCAGGGCC TGTAGCCATA GGTCCTGCTG GGCTAAATGA 1680
TACTGCTGCA GTTCCAGCTG TGATGTTTTT GGTTCCCTCA GACCTTACGC TTGAGCTGCA 1740
TGTTCAGGGT CAGAATGTGG TCAGTGGGCT TTTCACAGCT TCCACCGCAG TGGGCTGCGG 1800
GGTTGACCCC GAGTGGCCTT GGCCCGTACC TCCTGCAGGG GCTGCTGCGC ACCCTCTAAT 1860
GGCGTGTCTC TCTGTGTGTG TGTGTGTGTC CCTGCCCCAC 1900
|
