Tag | Content |
---|
EnhancerAtlas ID | HS060-14232 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr17:16948160-16949280 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxd3 | MA0041.1 | chr17:16948650-16948662 | GTTTGTTTGTTT | + | 6.32 |
|
| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_03884 | chr17:16946098-16949306 | Brain_Anterior_Caudate | SE_04928 | chr17:16945995-16949286 | Brain_Cingulate_Gyrus | SE_05858 | chr17:16945930-16949377 | Brain_Hippocampus_Middle | SE_23636 | chr17:16948057-16949109 | Colon_Crypt_1 | SE_26997 | chr17:16947979-16949280 | Esophagus | SE_27670 | chr17:16946032-16949283 | Fetal_Intestine | SE_28856 | chr17:16945831-16949268 | Fetal_Intestine_Large | SE_30353 | chr17:16946116-16950363 | Fetal_Muscle | SE_31426 | chr17:16947990-16949274 | Gastric | SE_34341 | chr17:16947967-16948823 | HCT-116 | SE_34638 | chr17:16945720-16949456 | HeLa | SE_35971 | chr17:16945814-16949284 | HMEC | SE_37027 | chr17:16942705-16952268 | HSMMtube | SE_41253 | chr17:16944246-16950304 | Left_Ventricle | SE_41792 | chr17:16948201-16949201 | LNCaP | SE_42192 | chr17:16945731-16949255 | Lung | SE_46284 | chr17:16945975-16950383 | Osteoblasts | SE_47491 | chr17:16948123-16948641 | Pancreas | SE_48203 | chr17:16944102-16949437 | Psoas_Muscle | SE_48857 | chr17:16947935-16949233 | Right_Atrium | SE_52055 | chr17:16945825-16949136 | Skeletal_Muscle_Myoblast | SE_52535 | chr17:16945677-16949207 | Small_Intestine | SE_55953 | chr17:16944222-16949226 | u87 | SE_63843 | chr17:16945713-16949268 | HSMM | SE_65457 | chr17:16947998-16949104 | Pancreatic_islets | SE_67627 | chr17:16944222-16949226 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr17 | 16949008 | 16949219 | chr17 | 16948199 | 16948865 | chr17 | 16948336 | 16948515 |
|
Enhancer Sequence | CTGAGACCTT CAGGGCACAA CTGGAATGGT AGTTTCTGAA ATAATGAGTG GGGTTATTTG 60 TGCTGGGAGA GGTTAGCCCA GCATTCTACC TCCTGGGATC TTTCAGGAAG AAACTGCTCT 120 TGAAAAGAGA GGAGGGAGAC TCAGGGCTGT TGCCAACAGC CTTCTCTGCT GCTCTCTGCA 180 TCCGGCCCTC CCTCTCACTC TCATCCTTAT GGCTCCATTA GAAAACCTCA ACCAATCGGT 240 TCCCATCAGT CTCCCCCAAG CCCCTGCTTC CTGCTGCCCC TCCCAGCCTG GAGCTTATTT 300 TAGACCGTCA AAGCTGGAAG ATACATCAGC CACCATCGAG GCCACTCCCT CCTTAAGAGG 360 AGAGGATACT GGGCCCAGGG AGGTGGTGGG CAGCCTTGGC CGGCTTTTGC TCTGGAGATG 420 TCATCTTCCC AGGAGCAGAC ATTTCTCTGA GCCTTTTGGT TTGAGGTTTA TTTCCTCAGC 480 TGTGGGTTTT GTTTGTTTGT TTTTCCCCTA GAGAGGCACA GAAACCTCTT GCAGGGACTG 540 TATTATGGCA TCAGACCTGG AAGGGACTTG GAGATCAGCT AATGTAACCA CTTCCTCTTA 600 CCGGTGAGAA GATTGAAACC CAGAGAAGGG AAGTGACTTG CCCAGTTCAG GGATGGAGCC 660 AGGATTCTGA AGCCAATGTT AGTTCCCCTA CTCCTGTTCA GGGTCTACAG TGGCCACACC 720 ATGAGCACAT GATGAGGACA ATAATGTCAG GGATAGTTAT GTTGCAGGAG GTGCCTTGAG 780 AATGCTGGCT TGGAGCAGTG GAGTTCTTTG CCTTTTCCTC CTCACGGAAA TTTGGAGTAA 840 TCTGGGATAA GTGATAAGTG ACCGTCCTTT ATTACTTGTT CCAGGCCCCT GTTCACAGAG 900 TGTCATTTAT CCTCCAGTTT TCCTGTGCAT TTCTCAGCGA CATACGGACC CAAATATACA 960 GTTTTTTTTT TTTTTTTGAG GCGGAGTCTC GCTCTGTTGC CCAGGCTGGT GTGCAGTGGC 1020 GCGATCTGAG CTCACTGCAA GCTACGCCTC CCAGGTTCAT GCCATTCTTC TGCCTCAGCC 1080 TCCCGAGTAG CTGGGACTAC AGGCACCCGC CACCATGCCT 1120
|