| Tag | Content |
|---|
EnhancerAtlas ID | HS060-07976 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr12:53592540-53594020 |
Target genes | | Number: 23 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXC1 | MA0032.2 | chr12:53593679-53593690 | ATGTTTACATA | - | 6.32 | | RREB1 | MA0073.1 | chr12:53593297-53593317 | CCCCTCCCCACCCCCACCCC | + | 6.83 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_12150 | chr12:53591844-53593465 | CD3 | | SE_15217 | chr12:53591328-53593484 | CD4_Memory_Primary_7pool | | SE_15217 | chr12:53593588-53595875 | CD4_Memory_Primary_7pool | | SE_17080 | chr12:53592054-53593060 | CD4p_CD225int_CD127p_Tmem | | SE_19284 | chr12:53590623-53593458 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_19284 | chr12:53593697-53595447 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_43582 | chr12:53588680-53594555 | MM1S | | SE_50443 | chr12:53592370-53593374 | Sigmoid_Colon | | SE_50443 | chr12:53593564-53594548 | Sigmoid_Colon | | SE_62837 | chr12:53591271-53631068 | Tonsil | | SE_67151 | chr12:53588680-53594555 | MM1S |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I053197 | chr12 | 53591192 | 53593226 |
|
Enhancer Sequence | CACCAAAATG GGAAGGTGGT CAGACTAAGA CCCACAGCTC CTTGGAAAGG AAAGGATAAG 60
AACAGAAGAG GAGGCGTCCT CCCCACCAAT ATGTCTGGTA TCCCTGGGAC TGGTTGGGAA 120
GCCACAGGGG AAGGAAATGG TTAGAGCGGC TTCTCAGCTG GCCCTAGGTG TCAGGAGACT 180
GGAGAAGCCA GACACAGACC TGACCATCTC AAGAGCGCCA GCTCCCCAGC TCCAGCCTGG 240
CACCTCTGCC TCTCTGCCTT GTGCAGACTC AGTATCTACC CTTCTTGTCC AGTCAGATTC 300
ACTGTGTGCC TTTCTCCTGG GTCCCTGTGT GCCTTTCTCC TGGGTCCTCT AAGCATCTGT 360
AGCTCTGCTT CCATGTGAAT TTGCCCCCAT CTCTTATCTG GGCTCCCACA CTGATCTAAC 420
CCTCCATCTT ACACTGAGAG AGGCAGACCT GCCCCCATCC CAGCTTGGGC ACCCCTCCTG 480
CTCTGCTGCT CCATGAGTTC TGTCTCTTTA AAGCATAAAC AAACAACAGC TTTGTTTGAA 540
GAGCCAGGGA GACACCTGCT CCCTAGCATC CTTCTTGGCC ACTTAGGTAG CTCAAGCCTT 600
TCCAGTCCCC CTCAAGCCCA TATGCTTCCA CCCCTTCCCT TTCTACCTGT CCAGTCATAG 660
GCTACTACAC ACCCAGGAAC AGAATGCCTC CACCCAAAAC ACAGACTTAG AAATCTAACC 720
ACACACTTGC TGCTATGGAC TGAACTCTGC ACCCCTACCC CTCCCCACCC CCACCCCATC 780
CTCTGTTGAA GCCCTAACCC TCCATGTGAT GGTATTTGGA GATGGAGCCT TTGGGAGGTA 840
CCTAGGCTTA GATGAGGGCC TAAGGGTGGA ACCCTCATGA TGGAATTAGT GCGCTTACAA 900
GAAGAGAGGC AGTTCCCACC CCCATCCCCC AACCCCATCC CCACTATGTG AGGACACAGC 960
GAGAAGGTAG CCAGTCTGCA AGCAAGGAAG AGGGCCCTAA CTGAGGAACC AAATCAGCCA 1020
GCACTTTGAT CTTGGACTTC CCAGCTTCCA ACATTAGGAG AAATGAATTC CTGTTGCTTA 1080
AACCACCCAG CTTATGGTAT TTTGTTATGG CAGCCCGCAC TGGGTAGTAC CTTTCTCCCA 1140
TGTTTACATA CACAACAGCT CCCTCTACCT ATACACAAGC ATGAATTCCC ACAAGCACAT 1200
ACTTTCTCCC AATTCATGGT CACAAATTCT CTCCATATAT ACACAAGCAA ATGGATACAG 1260
ACATAATCCT AAGTGCACAA GAAACTTGCA TGCATGTGTA TGCACACACG TATATCCACA 1320
CACAGGAGTC CTATGTGCAC AAACTCAGTC ACACATGAGA CTGTGGAGTG TTCCCAGAAA 1380
ATCATACATG TGCCCACACA ATCACACACA TATATCCAGG CTGCACATAC ATATACACAT 1440
ACACATACAC ATACACATGG TTCAAAGACC ATAGGCCCAT 1480
|
