EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS060-07967

Organism

Homo sapiens

Tissue/cell

GM12891

Coordinate

chr12:53472430-53473090

Target genes

Number: 23
Name	Ensembl ID

KRT8	ENSG00000170421
AC107016.1	ENSG00000225410
EIF4B	ENSG00000063046
RP11	ENSG00000257475
TENC1	ENSG00000111077
SPRYD3	ENSG00000167778
SOAT2	ENSG00000167780
VTI1BP3	ENSG00000258074
HIGD1AP1	ENSG00000258016
ZNF740	ENSG00000139651
ITGB7	ENSG00000139626
RARG	ENSG00000172819
MFSD5	ENSG00000182544
ESPL1	ENSG00000135476
PFDN5	ENSG00000123349
C12orf10	ENSG00000139637
AAAS	ENSG00000094914
SP1	ENSG00000185591
PRR13	ENSG00000205352
PCBP2	ENSG00000197111
MAP3K12	ENSG00000139625
TARBP2	ENSG00000139546
NPFF	ENSG00000139574

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr12:53472990-53473000	GCCCCGCCCC	+	6.02
MYCN	MA0104.4	chr12:53472690-53472702	CACCACGTGGCC	+	6.07
MYCN	MA0104.4	chr12:53472690-53472702	CACCACGTGGCC	-	6.07

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_56430

chr12:53472238-53475574

u87

Enhancer Sequence

GCGCCGATGG ATGGGGGTGG GATGATCCAG GTATTTAAAC AACCATCAGT CCCTACATAT 60
AAATGAATGA ATGATTTTTC CTGGGAGCCA AAAGTGAGAA AGAGGTGAAG TACTCTTCTC 120
TTCCCATTCC CTAAACACTG GGACAGGGGT TTTCTTGAGG CCTGACATTG CCTTGCACAC 180
GGTAGGTGCT TAGTAAGCCT TGGCTGGGCT GAATTTGATC CCAATACGCA AATTACGACT 240
CTTATGCAGT AGCTACAACC CACCACGTGG CCCAGAAGAG TAGGCACCTG TGGGACAGAC 300
AGCCCTAAGA TTCCACTCCC GGGCACTCAG CCAGGACTCA ACCCCAGGTA GATGCTGGTT 360
GCGCAGACCC CACAGTCTTG GCACCGGCGA GTGGCGGCCC TACTGGGCCC TGTCTCCTCC 420
CCGGGCACGG CCTGATCACT GAGATGAGAC CCGGGAGCAG CCGGGCCCCA GCCCATCCGT 480
GTGCCTACGC CCAGTCTCCC CAGGCCCTGC ACTGGGCCGA GGGTGCAGCA ACAGAAGAAG 540
CCCAGTGACC AGAGCGCAGG GCCCCGCCCC TGGCCCCAGA GCCCCCGCCC AGGACCCCCG 600
CCTTCCGCTT CAGGCTCCGG GGAGATACGA GGCCTCCGGG ACCCCGCCCC CGATCCCCGC 660