Tag | Content |
---|
EnhancerAtlas ID | HS060-02637 |
Organism | Homo sapiens |
Tissue/cell | GM12891 |
Coordinate | chr1:198645310-198646670 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA | MA0071.1 | chr1:198646024-198646034 | ATCAAGGTCA | + | 6.02 |
|
| Number of super-enhancer constituents: 36 | ID | Coordinate | Tissue/cell |
SE_09213 | chr1:198635872-198655696 | CD14 | SE_10200 | chr1:198645212-198655760 | CD19_Primary | SE_10874 | chr1:198579403-198671825 | CD20 | SE_11822 | chr1:198641583-198659594 | CD3 | SE_12868 | chr1:198644808-198645704 | CD34_Primary_RO01480 | SE_13336 | chr1:198646032-198647150 | CD34_Primary_RO01536 | SE_14382 | chr1:198640936-198657701 | CD4_Memory_Primary_7pool | SE_15405 | chr1:198645022-198653101 | CD4_Memory_Primary_8pool | SE_15805 | chr1:198643633-198645531 | CD4_Naive_Primary_7pool | SE_15805 | chr1:198645559-198652877 | CD4_Naive_Primary_7pool | SE_16283 | chr1:198644729-198655705 | CD4_Naive_Primary_8pool | SE_16874 | chr1:198641765-198654513 | CD4p_CD225int_CD127p_Tmem | SE_17305 | chr1:198604496-198661531 | CD4p_CD25-_CD45RAp_Naive | SE_17776 | chr1:198639811-198661458 | CD4p_CD25-_CD45ROp_Memory | SE_18245 | chr1:198640214-198661625 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19200 | chr1:198644405-198653286 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19995 | chr1:198643678-198661190 | CD56 | SE_20746 | chr1:198646194-198653440 | CD8_Memory_7pool | SE_21460 | chr1:198645185-198654564 | CD8_Naive_7pool | SE_21924 | chr1:198643564-198657909 | CD8_Naive_8pool | SE_22285 | chr1:198604395-198665148 | CD8_primiary | SE_25576 | chr1:198643754-198654631 | DND41 | SE_31026 | chr1:198644521-198648451 | Fetal_Thymus | SE_39433 | chr1:198644242-198645519 | Jurkat | SE_39433 | chr1:198645558-198648110 | Jurkat | SE_46430 | chr1:198645462-198647113 | Osteoblasts | SE_49861 | chr1:198641770-198648291 | RPMI-8402 | SE_58290 | chr1:198564715-198671046 | Ly1 | SE_59080 | chr1:198588455-198654514 | Ly3 | SE_59608 | chr1:198585244-198671628 | Ly4 | SE_60444 | chr1:198588133-198656098 | DHL6 | SE_61004 | chr1:198588339-198656148 | HBL1 | SE_61429 | chr1:198565046-198658062 | Toledo | SE_62210 | chr1:198565497-198666528 | Tonsil | SE_66263 | chr1:198644242-198645519 | Jurkat | SE_66263 | chr1:198645558-198648110 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I198660 | chr1 | 198629438 | 198661503 |
|
Enhancer Sequence | AAGGTAGTAT TGGACGCCAC AATCTTTAGG AACCATGCTT CTGAGTTTTA AAATGGTGAC 60 TAGTTTAGCA TAGATTCAAC ATAAGCATTA GGTGTTCTTT TGACATTTGG GAATCAGCCA 120 ATCAACAGGA GGAATAGTAA ATTGAATACG AACTTGAAAG AGACCATGTC TTTTTTTCAT 180 CCAACTGTGA AAAACTTTCT TTGTACAATT GTTAAACTTA AGAAACAGAT GGTAGATCTG 240 TATCAGTCAG TGAGGGGTTT CTGAAGTACT TTTCTGGATG AATGCCAAGA AAATGGGTTT 300 CTGAGACTTG CATGGCTCTG GATTTGTTCT GAGCTGTTTA GTGAAGTGAG GGCTGGCATT 360 CAGAACCCAG GGGAGGGGGA GTAGTCATTC CCATTGCCTT GCATAGAGAT AGAATCACAG 420 GTGACAGGTC ATTGGAAAAT CACTTCTTGA GAGTGGGTAT CTTTATTTTG AGTTGGTATC 480 TTTTTGAGAG TTGGCCACTC ATAAGCCTTG CTTTTGATAA CATTTCTTTA AATTCCTCCA 540 AGGAACAAGG GGAAGTGCAA AAGGAATACG ATAAAGTGCA GCATTGAATG AGATAAGCAT 600 ATTCAACTTA AGGGGCACAC TAAATACTGT AATCTGGGAG CATAACTCAG ATTTCTTTTC 660 TTCTTTGCTC AGTATAAGTT GCATGATCAT AGAAGATTTA TGTAGAAGTC AGAAATCAAG 720 GTCAAGAGGG TAGGCATATT TAGATTCTTA CCCTATTCAT AATTAACAAT AAAATAAGAT 780 TTTGTGTCCT GATTCAGAGA ATGGATGGCT CAGTCCTTAT AACCTCTTAA ATTAGTTTTA 840 TCTATAACTG GATTTCTGAA TCTCTTTTGA AAATTACTAC CATTGATGGT CACTGAGTGA 900 AAAAAGCAGA AGGATAGACT GGTGTTAACT GTAATGAACA TTTATCCAAC ATTACCCGTG 960 GGCCTGCTAT CCATTTTAAA TTCTAAAAGC ACTTTACAGC TTGCTAATAC ATAGCCTCAT 1020 CTCCAACCTT GCATTCCTAA GTTCCACTCT GCATTCCACA AATGGGATTA ATCACCTACT 1080 GAAAGCTCTA TAATAATTCC TGTCACCTGG GGATAATGTT AAAACTTCTC AGTTTGTGAG 1140 AGAGGGCCTT CATTATCAGT GTCACATTTA TTTTCCAGAA AGATTTCTAG CACCCCTCTA 1200 CCTTACATCT TGCTTTTCAG CCAGGAAGAA CAACTTTTAC TTTCTGAAAT GTACTAGATT 1260 CTCAATGTTG GGCCACATTG CTATTTTTTT TTTTTCTAAA AGACTCATCA TCTTCCTTTC 1320 CTACCTAACT CAAACATATC CCTCTTAACT TAGACATTAC 1360
|