EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS060-01987

Organism

Homo sapiens

Tissue/cell

GM12891

Coordinate

chr1:150600440-150601530

Target genes

Number: 21
Name	Ensembl ID

MRPS21	ENSG00000187145
RPRD2	ENSG00000163125
TARS2	ENSG00000143374
ECM1	ENSG00000143369
LINC00568	ENSG00000228126
ADAMTSL4	ENSG00000143382
AL356356.1	ENSG00000225996
RP11	ENSG00000237781
C1orf138	ENSG00000203804
MCL1	ENSG00000143384
ENSA	ENSG00000143420
GOLPH3L	ENSG00000143457
HORMAD1	ENSG00000143452
CTSS	ENSG00000163131
UBE2D3P3	ENSG00000224690
CTSK	ENSG00000143387
ARNT	ENSG00000143437
SETDB1	ENSG00000143379
CERS2	ENSG00000143418
FAM63A	ENSG00000143409
PRUNE	ENSG00000143363

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL1	MA0477.1	chr1:150600500-150600511	AGTGACTCATG	+	6.14
MNX1	MA0707.1	chr1:150601285-150601295	TTTAATTACC	-	6.02
ONECUT1	MA0679.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.73
ONECUT2	MA0756.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.51
ONECUT3	MA0757.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.79

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_14726	chr1:150599729-150603822	CD4_Memory_Primary_7pool
SE_18894	chr1:150599212-150603232	CD4p_CD25-_Il17-_PMAstim_Th
SE_19754	chr1:150599600-150602962	CD4p_CD25-_Il17p_PMAstim_Th17
SE_64527	chr1:150594020-150603142	NHEK

Enhancer Sequence

CCTAGGCTAT CCTACATGTC ACATGAGAAA TTAAAAAAAA AATAGTTTGG GGCTGGGAGC 60
AGTGACTCAT GCCTGTAATC CCAGCACTTT GGGAGGCTGA GGCAGGTGCA TCACTTGAGC 120
TCATGAATTC ACTACCCGCC TGGGCAATAT GTTGAAACCC CGTCTCTACA ACAACAAAAA 180
ATAGTTTGCT AAATGTTTCC TCCTTATTTT TTTCTTTCTT TTTTAAAATT GCTACACGAC 240
AAAGCAGTTC CTTCTTTATT CAAGGTCTAA GCCACCTGTT AGGTCTCCCT GTGGAGGCGG 300
CTAGCTATGT GGCCTTCTCC AAAGATCTCC ACCTGAGTAA TGGCACAGCC TTGCTTCAAC 360
ATTTCCACAA ATATTATGGT AGCAAGCTGA TAAACAGAGA GGAAAATGAT ACTGTTTTTA 420
ACCTCAGGAA AACAAAGATA CAGTAGGCTC ACTAGTATTT ACCCACCAGT TTTCATCAAA 480
AAAATCAATA CCTACCCTGG TGGTGCAGGG ACTCTCACTA CTGTAGTCAA TCTCTTTTTT 540
TTTTTTTTGT GGTCCCTGCT GCCCTTTAGT GACTTTTTGA AAAGATATGA AGTCAACGTA 600
TGACTCTTTT TAGTGGAATT ATATTCCTTT CTCTTGGAAA TTACGCATAG ATATAACACC 660
AAGTGTATTT AATGAGTACC TGAACCCAGT ACTAAATTTT AAAAGTCAAA TACAAACCCC 720
AATAAGGGGT TTATTTGGCG TTAGTGTTTC CATCACGGAA TCGCAGGTGC ACTAAGTCCC 780
TGCCTTGGAA GTCTAGGGGA AGAGAGAAGT GTCTTTCTCA CGACCCTGTC GGCGTCTTTT 840
CCAAGTTTAA TTACCATGAT TCTGTTTGGA ACTCTAGCCC TCTTCAATAT TGCTGGGTCC 900
TCACTGAAGG TGAGCAATAG ACCATCCTTA GCTACTAAAA TAGGTCTCTT GAGAAAGTTG 960
CCGCCTTAAA CTAGCCATTA TAATAACTAC ACTTCTCCCC TCCCCCAATA CTGGTTTTTT 1020
TTTAAACGTC TTTACCTCGA CCCCTATCTT TGCGGATTGA GGCTGCGGGC CCCAGCCCGG 1080
TTGCTGGGTC 1090