EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS060-01103 
Organism
Homo sapiens 
Tissue/cell
GM12891 
Coordinate
chr1:43407320-43408890 
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs6657798chr143408279hg19
TF binding sites/motifs
Number: 3             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
NFE2L1MA0089.2chr1:43407593-43407608GCATGACTCAGCAGG+6.75
Nfe2l2MA0150.2chr1:43407591-43407606GAGCATGACTCAGCA+7.66
ZNF263MA0528.1chr1:43408088-43408109CCTTTTCCTCTTCTCTCCTCC-6
Number of super-enhancer constituents: 47             
IDCoordinateTissue/cell
SE_01795chr1:43403674-43411142Aorta
SE_02447chr1:43405569-43410613Astrocytes
SE_04284chr1:43406405-43408666Brain_Anterior_Caudate
SE_05390chr1:43406422-43410832Brain_Cingulate_Gyrus
SE_06192chr1:43406287-43411226Brain_Hippocampus_Middle
SE_07319chr1:43406534-43411143Brain_Hippocampus_Middle_150
SE_08269chr1:43406272-43411134Brain_Inferior_Temporal_Lobe
SE_10377chr1:43406726-43412417CD19_Primary
SE_11009chr1:43387831-43425728CD20
SE_13825chr1:43406488-43407528CD34_Primary_RO01536
SE_14471chr1:43395753-43414527CD4_Memory_Primary_7pool
SE_19657chr1:43406292-43410967CD4p_CD25-_Il17p_PMAstim_Th17
SE_20345chr1:43407577-43412424CD56
SE_20799chr1:43405756-43409955CD8_Memory_7pool
SE_22754chr1:43406075-43412634CD8_primiary
SE_23189chr1:43406366-43410995Colon_Crypt_1
SE_23904chr1:43407223-43410890Colon_Crypt_2
SE_25177chr1:43406652-43411022Colon_Crypt_3
SE_26580chr1:43395721-43413249Esophagus
SE_29267chr1:43400819-43410293Fetal_Intestine_Large
SE_31882chr1:43406451-43411068Gastric
SE_33837chr1:43401475-43412846HCC1954
SE_34353chr1:43395339-43412997HCT-116
SE_35049chr1:43400682-43411164HeLa
SE_36013chr1:43405529-43411011HMEC
SE_37191chr1:43404622-43414101HSMMtube
SE_38794chr1:43405440-43410875HUVEC
SE_39883chr1:43405665-43410931K562
SE_41038chr1:43405665-43414583Left_Ventricle
SE_41620chr1:43406373-43411014LNCaP
SE_42796chr1:43405575-43411121Lung
SE_49782chr1:43407568-43410944Right_Ventricle
SE_50202chr1:43406339-43411463Sigmoid_Colon
SE_54088chr1:43406450-43408242Spleen
SE_55340chr1:43407386-43410138Thymus
SE_55821chr1:43405505-43410178u87
SE_57045chr1:43406294-43410932VACO_400
SE_57417chr1:43405825-43410963VACO_503
SE_58269chr1:43407361-43407923VACO_9m
SE_58269chr1:43408012-43408449VACO_9m
SE_58561chr1:43388242-43430420Ly1
SE_60624chr1:43388552-43428820DHL6
SE_62392chr1:43388423-43425814Tonsil
SE_64094chr1:43405747-43410036HSMM
SE_64340chr1:43405657-43411071NHEK
SE_67781chr1:43405505-43410178u87
SE_68708chr1:43406265-43410984H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr14340735543407700
Number: 1             
IDChromosomeStartEnd
GH01I042929chr14339554143414526
Enhancer Sequence
CCCAGACCAA TTAAATCAGA ATCTGGGGGC GTTCTGGAAA CCCCAATGTG CAACCAAGTG 60
GAGAGCTCAA CCTCCCTCTG TTTCCTCCCA GCCTGTCTTA CAGACTTTCC ATCTGTAAGG 120
ATTCCCAAAG GGAGCCAGTT CTGAAGCACA CACTTTGGCA AGAGCTGTCA AGAGCACTTA 180
GCAAATGCAG GGCTTGGGGC TGGTCCAAGC ATGGGCCCAC GGTCTCCATG CCCAGCAAAC 240
TTGGAAAAGT CCTGTCACCT CCCCTGCAGC TGAGCATGAC TCAGCAGGCC AAGCCTTCCT 300
GGTGACTTGC TCCTCAGCAT CGGGCGTGGC CCCATAGCCA CTGTCTGCCT ATTTGGAAGA 360
AGCCCAGCTA ACTCTAGACA CTACCTGGTT CCCCCAAACA GGACCCTGAT CTTTGGGAGT 420
CACTGCACTC ACTTTCTAGC CCCATCCGTC TGGACAAGAA ATGTGGTCCT GACGTGAGGA 480
CTGCCCACTC TCATTTGGTC CTCTCTGGGA AGGTACAGAT TTTTAAACGG GCAAGGCAGC 540
TGGTTAGGAA GACAACCTGA GGCCATGGAA ACAACAGAGC TTGGCTTCTG ACTCCAGCAT 600
TCAATAGCTT TGTGACCTTG GGCCTGTCGG CCATTTCATC TGCCTGGGCC TCAGTTTCCG 660
GGTCTACAAA ATGGAAATCA CCACCCAATC TCATAAACAC AAGCAAAATG CCTGGTACAG 720
AGGAAGGGCT CAGTTTCCTT TCCTGTCCCT GCCTCCTACC CCCTACCCCC TTTTCCTCTT 780
CTCTCCTCCT TAATGCAAGT AGGCTGGGCT GGAGGAGATG GTCTAGGTCC CTTCCCATCC 840
TGACATTCAA GTAAACAAGT GAGGACAGAT CTAGGATGCA CGGCAGGGAG GAGGAAGCCA 900
GCACAGACCT TCACCCCCTG TGGCTCCCTA GGGCAAGACG CCATTTCTGC TTTGACTGCC 960
ACAGGGCCTT CAGGGAGAGG ACGCGGTTTC AACCTACAAA TAAAGGAAGT GTGCTGCCTG 1020
TGGATGGGTA TGAGTGCAGG CTCAAGGACC ACCTGGCAGG CAGGTGTTGG ATACCAGCTC 1080
TGTCTCTGAC TTAGCTGGGT GATATTGGGC GGGTTTCCTC TCTCTGGCCG TTTCCCACAC 1140
CTGCAGGCTG GGAGTGGTGC CTGCTGCCTC CTGACAGTGC TGCAGTGAGC ATCAAGTGAG 1200
ACAAGCCCAT GAAAACCCTC TGCAGCCCCA GAATGCCACG GAAATGCAGC ATTATTGTAT 1260
TGAGCTTTGC TTTGAGTTTA TTATATCATC AAACATATTA TTAAATGACT GAGTTGGGTG 1320
GGGGGTTGGT CAAGAGGGCC TATACAAGAC CCCAGGATTC TGTGGGACCT GAGATTCTAG 1380
AATTCTGCCA CCCTGATTCC AAAGCAAGAG AAGAGTCTCT GACATGATCA GGGCCAGAAA 1440
ACTGGCTGGA GAGGCAGACA GTACAGTGCG TTCATATAAA TGACTCTAAT TCAGGTGGTG 1500
GCGTGAGACT GTGGGCATGT GTGATGTGCA ACAGAGCAGG CTGGTGTCCA TAAGCCAACG 1560
ATGGCACAGT 1570