EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS060-01023 
Organism
Homo sapiens 
Tissue/cell
GM12891 
Coordinate
chr1:40848680-40852920 
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs1391315chr140852382hg19
TF binding sites/motifs
Number: 9             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
NR3C1MA0113.3chr1:40851491-40851508CAGTACATTTTGTTCTT-6.13
NR3C2MA0727.1chr1:40851491-40851508CAGTACATTTTGTTCTT-6.23
RFX2MA0600.2chr1:40852307-40852323TGTTGCCATAGGAACA-6.04
RFX2MA0600.2chr1:40852307-40852323TGTTGCCATAGGAACA+6.13
RFX5MA0510.2chr1:40852307-40852323TGTTGCCATAGGAACA+6.28
RFX5MA0510.2chr1:40852307-40852323TGTTGCCATAGGAACA-6.37
SPI1MA0080.4chr1:40851509-40851523AACTTCCTCTTTTC-7.14
SPICMA0687.1chr1:40851509-40851523AACTTCCTCTTTTC-6.31
ZNF263MA0528.1chr1:40850814-40850835TCCCCTTATCCCCCATCCTCC-6.34
Number of super-enhancer constituents: 39             
IDCoordinateTissue/cell
SE_03134chr1:40848785-40851034Bladder
SE_03134chr1:40851511-40852921Bladder
SE_03839chr1:40848558-40849652Brain_Angular_Gyrus
SE_03839chr1:40849720-40850212Brain_Angular_Gyrus
SE_03839chr1:40850611-40852546Brain_Angular_Gyrus
SE_04329chr1:40846335-40853554Brain_Anterior_Caudate
SE_08414chr1:40846289-40853002Brain_Inferior_Temporal_Lobe
SE_09232chr1:40844996-40853879CD14
SE_10167chr1:40845196-40853865CD19_Primary
SE_10889chr1:40837614-40877708CD20
SE_11872chr1:40845246-40853694CD3
SE_13110chr1:40848382-40853729CD34_Primary_RO01480
SE_13584chr1:40844944-40853555CD34_Primary_RO01536
SE_14445chr1:40838829-40853557CD4_Memory_Primary_7pool
SE_15530chr1:40846294-40853798CD4_Memory_Primary_8pool
SE_15973chr1:40845677-40853867CD4_Naive_Primary_7pool
SE_16635chr1:40849445-40853784CD4_Naive_Primary_8pool
SE_16957chr1:40846343-40853705CD4p_CD225int_CD127p_Tmem
SE_17325chr1:40838557-40873402CD4p_CD25-_CD45RAp_Naive
SE_17842chr1:40844625-40864199CD4p_CD25-_CD45ROp_Memory
SE_18386chr1:40838397-40853796CD4p_CD25-_Il17-_PMAstim_Th
SE_19424chr1:40846153-40853702CD4p_CD25-_Il17p_PMAstim_Th17
SE_20011chr1:40846373-40853881CD56
SE_20796chr1:40844923-40853882CD8_Memory_7pool
SE_21559chr1:40846275-40853745CD8_Naive_7pool
SE_21987chr1:40846094-40863432CD8_Naive_8pool
SE_22383chr1:40844968-40853881CD8_primiary
SE_26232chr1:40845639-40853557Duodenum_Smooth_Muscle
SE_31081chr1:40846370-40853673Fetal_Thymus
SE_32537chr1:40844774-40853751GM12878
SE_40132chr1:40846146-40852943K562
SE_43804chr1:40845348-40853547MM1S
SE_50468chr1:40846794-40853665Sigmoid_Colon
SE_53092chr1:40846833-40853666Small_Intestine
SE_53508chr1:40846820-40854583Spleen
SE_55131chr1:40846406-40853729Thymus
SE_58445chr1:40828930-40871082Ly1
SE_59998chr1:40841808-40870673Ly4
SE_62202chr1:40838568-40871500Tonsil
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 3             
ChromosomeStartEnd
chr14085200040852800
chr14084896740849502
chr14085143140851768
Enhancer Sequence
CCCTATGTCA GTCAAGGACC AGTCAGAGGA ACAGAAGCCA CTGTTGGTCT TATAAGCAGA 60
GGGAATTTAA AATAGGGAGT AGGTTACAAG GCTGCTAGAA GAGCCAAGAA GCTGAACAGG 120
GGCTGGTGAG GCACCCATTC GATTAGCAAT GCCTGGGAAC TACTATGCCT GCAAGGAAAA 180
TAGTGCACTG GTGTCACCAA GGGCTGGAAG TCCGAGTGGT CTGGTGTGAG CGGAAGCATG 240
GAAAGAGGAG CAGTCTGGTG GCAGCTGGAA GTAGGCCGAG TGAGAGAGCG TATTACCCTG 300
GCTGCTCCCT GCTCCTGCCT CTTATCCTCC TCAGTGCCTC CCATTGATGG AACTTATCCT 360
GAAATCAGTT GGCAAAGGGA GCCTGGGAGA TGTAGTTCCC TGTGATCAAG CGGAGCAAGG 420
GAGGGATCCC AGCGCAAACA GGCAAAGACA CAAAGGCACT GAATTCTCCA AGATGTAATT 480
TCTTTCCCCT TATAGTATTT GAATTATTTT GGACAAGAGA ACGGAAGGGT TTTCCGGCAG 540
ATATAACATT GCGTGCTTCT AAAGGATCTT GACTGTTGCT GAAACAATTA TTAGTCCCAG 600
GAAGTAATGT AACAACTCAG TCATAGTTTA TATACTTAGG GGGTATGACT AGGCAAATTG 660
GCTCCTGTAT TGAATATGTA TTTGACTGTT GGCTGCTGCC AGGAGCAACT TATCGTTTGG 720
TTACTCAGAA AATAAGTTCC CACCCTGTCA ATTCTGGGAA GTCTTAGGTA TGGTGTATCC 780
ACATTGAGTA TATCTACAAC TGGACAGCTT GAGTTAGTCA CACAGAAGCC ATACACAGAA 840
AATGTTGAGG ATTGCAGCGT TAAAACATGG TACAGCTCAC TCTTTTTTTT TTCTTTCGTT 900
TTTCTGGAGA CAGAGTCTTG CTCTGTTGCC CAGGCTGGAG TGCTTTGATG CGATCTCAGC 960
TCACTGCCTC CTCTGGCTCC CGGGTTCAAG TGATTCTCAT GCCTCAGCCT TCCAAGTAGC 1020
TGGGATTATA GGTGTGTACC TCCATGCCCA GCTAATTATT TGTATTTTTA GTAGACACAG 1080
GGTCTCACCA CATTGGCCAG GCTGGTCTCA AACTCCTGGC CTCAAGTGAG CTACCTACCC 1140
TCCTTGGCCT CCCAAAGTGC TGGGATTGCA GATGTGAGCC ACCAAGGCCG GGCCTCAGCT 1200
CAGTGTTTTC TTTACAGTTA AGGTAACTGC AGTGTGGCTG TTTTATCTTG TGCTGCATGT 1260
TAGTTTAACT AGTCTTATTG ATTTGTTTGT TTTACCCCAC AACTTCAGAT AAGTTTGCAC 1320
TGGGTGAGGG AGGCAAGATC ACTGGGTCTG TTTTCTTCTA CCCTGACCTG AAAAAAATAT 1380
TTTGTCTTGT AAGGAATGTT GCTGCTGCTC CATTTAAGGG CAGAGCTTTC CAAGTTGTGG 1440
CTACTTGTTT TCTACGTGAT TATAAAAGTG TCTAATGAGT TATATGAGAC AAGTTCAGCC 1500
CTTTCTAGAA GTGCTTTTTT TGTCAATCAG GTCACCTGCA TTTGGGCCCT TGCTATATTA 1560
ATGGAATTGG TGGAACTAGG CCAGCAGAGT TTTCAGTGCA GTGTGAGTAT GTTTGCTTTT 1620
AGGCTGTTAC TTCCCACAGA GGCCACAGAT AAAGGACTCT CGTTGTTTGA GTGAAGTTAC 1680
CAACTGTAAC AATTGCATAG GTTTCCTTGT TTCTTTCTTT TCTCCAAAAA ACTCATTTCC 1740
TCTTGGCAGG TGTTACTATA ATTCACAGGT GTAATGAAAA TGTAATTTGG GATTTGAAAA 1800
AGCATATCAG ACTGCTTCCC AGAGTACCAG TTCTTTTCAG CTGGTCCATT TCAACTTAAG 1860
AGGTCCATCT ATGCATTTTT GAAGCTTCAT ATTTAATAAA TATAATATTT CACTGCTGTG 1920
TTTGACTATT CCGTTTCCCA CACTTTCTCC TTCCCTACCC CACTCTTCTG GATCCTGTGT 1980
TTCCCCACAG GCTTTGTGAA TGCCGGTCCA CTGATGGCTG AACTGCAGGT CTCTCCCCAG 2040
TGGAAAGCCC CAGAGATGAG CCAGATCTGC CTCAGCTGTG GCCATCCGTC AGCGTAAGGT 2100
TGCTCTGGTG GTCGTCTTCA GTTTGTCCAG CTCTTCCCCT TATCCCCCAT CCTCCCTCAT 2160
GTGTGGCTGA AGCTTGCCCT GGAATCCCAC CTTTGTAGCA TGTCACTCGG TAGTAGTAGA 2220
ATTTTATTAT TGTTGCTTTT TTTCATTTTC AATTAATGTT AAGTGATTCT CTGACAAATT 2280
TTGTTGACCA TAGCCCTCTT TTCCCCTCAG TTCATAGATT TCCTATAGGA ATTCTGGTTT 2340
GCTTTTAAAT ACATATAGAA TACAGTTTAT TTAAGTTCTG GATTTCATAA GCTTACTTGG 2400
AAAATACTTT TTTAAAAAAA ACATTTCAGG TCAAAGCTTC CAAAAAGAAA TTTCTTAATC 2460
TGAAACAATG AGAACTGGGT TCCTCAGGCC TCATGTCATT TCCCCTCACC CACAAATCAA 2520
ATGTGTAATG CTCTCATTTT ATGATGTATT GAAACAGTGA AGCAAATGCG AGAGGGAGAG 2580
AGACCTACTC TCAGCTGTAG CTGATAAGTG TGTCCTAGCA TGGTGATTTG AGCAAATAGA 2640
GCACCTTTTC TTTTCCTTTT CTTCAAATAG CCATGCTGTC TTTTGCAGCA GTTGCTGGTG 2700
ACGGAATACC ATAAATCCCC AGGCCTCTAC CACAGAGCTT ACATCTTTAG ATGTGGGTTT 2760
ACATGTTAAT CCTACAATGT TATTTCACCT CAGTGGTCTG AAGTGCGCAC ACAGTACATT 2820
TTGTTCTTTA ACTTCCTCTT TTCTTGTCTA ACTGGAAGTC CCCAAATGTG TGGATTTAGA 2880
AATGAGTTCT CTAGTGTTTC TAGTTTTGAG TTAAGGAAGT TTTGTCTTGA TATTGTTTAG 2940
GTGGTTGTTT TTGTTCTGTG CCTTCAAAAA TAATTTCTTA CAGAATTTTC TGTGTGAACT 3000
GGTGACATCA TATGCTGTAG TGTAAAGCTT GTAGAGAAGG GGGCATTGGT GTCTTTTTGT 3060
TGTTGTTGAC ACTTTATCAC TCCTTATAAC TGACACAAAC CCTGAGAAGA GAAACAGGAA 3120
GGAAACTCCC TGTTCTTACC ATGATGCTTT TGTTCAAAAT AGCTGAAAAC AGCAGAGCTG 3180
ACGGAAACCA ATTTGAGTGT GACAGCTGAT TTGAGAAAGA ATGAATTAAG AGATTCAGGC 3240
TCTTCTGCTA TGTTGAAATC ATTTTTACTG AAAGATTAGC TGTTTGGAAC AGGGATTGAC 3300
TTTGTCTCTC TGAAAGTAGG CATGAAGAGT TCGGTTAGAG GAACCGTTAC AGATGGAGGA 3360
GAAACTTGAG GAAAGGTCTT TCCTGTAGTG TGACTACAGT ATTAACATTC CCAGATTATA 3420
TGAAAGAGAA AGGAAGCTTC ATTAAATGAA ACATTGGAAT CAGGAAGACT CCGGCTTGGC 3480
TCCCTGAGCA TTCTAACTTG TTCTGAGCCT AGTCTCGACA GAAGTAGCCT GACACAAGTG 3540
GCTCAGATCA AGGGTCCATA TTACGGGCAG AGTAAAAATA GGTCCCAGTT TCATTAGACT 3600
TCTCATACAT TTAAGGAAAA AAAGATTTGT TGCCATAGGA ACAGACCAGT TGTTTTCTGT 3660
CTTGTGGGAT TTTAGGAGCT GGGGAGATAG GAGGATCCCT GTGCTTATAA TCTAAACATC 3720
AGTAAATGCT GGTTTTTTTT AAAACAACAA CAACTTTATC TTTTATGATT CTGAAACCTA 3780
TCCACGATAA AAATCATTGG AAAGTATGAA AAATATAATG ATGCTGAAGG TATTTTTCAT 3840
AATTCTTTTT TTTTTTTTTT TTTGGAGACA AGGTCTCTCG CTCCGTCGCC CAAGCTGGAG 3900
TACAGTGGCA CGATCTCAGC TCACTGCAGC CTCTATCAGG CTTAAGCAGT TCTTCTGTCT 3960
CAGCCTTCAT AGTAGCTGGG ACTACAGGTG CACACCACCA CGTCCAGCTA ATTTTTGTAT 4020
TTTTAGTACA GACAGGGTTT TGCCATGTTG CCCAGGCTAG TCTCGAACTC CTGAGCTCAC 4080
ATCATCTGCC TGCCTCGGCC TGCCGGAGTG CCAGGATTAC AGGCATCAAC CACCATGCCC 4140
GGCCTTATTT TTCATAATTC TTATCACCCA TTTACTTGAG CTTATACCAT AATGATTTTA 4200
TATCATTCTT TTTTGCTTAA CATTTATTAT AAGCTTATTT 4240