EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS060-00672

Organism

Homo sapiens

Tissue/cell

GM12891

Coordinate

chr1:27116780-27117240

Target genes

Number: 16
Name	Ensembl ID

RPS6KA1	ENSG00000117676
ARID1A	ENSG00000117713
PIGV	ENSG00000060642
AL034380.1	ENSG00000241188
ZDHHC18	ENSG00000204160
SFN	ENSG00000175793
RP1	ENSG00000226698
GPN2	ENSG00000142751
NUDC	ENSG00000090273
GPATCH3	ENSG00000198746
C1orf172	ENSG00000175707
RP11	ENSG00000172746
OSTCP2	ENSG00000225294
TRNP1	ENSG00000253368
FAM46B	ENSG00000158246
SLC9A1	ENSG00000090020

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_00374	chr1:27108384-27117149	Adipose_Nuclei
SE_11056	chr1:27107425-27116953	CD20
SE_13729	chr1:27108488-27117138	CD34_Primary_RO01536
SE_14400	chr1:27107911-27117788	CD4_Memory_Primary_7pool
SE_17869	chr1:27110313-27118019	CD4p_CD25-_CD45ROp_Memory
SE_18323	chr1:27108133-27118589	CD4p_CD25-_Il17-_PMAstim_Th
SE_19478	chr1:27112196-27118802	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20193	chr1:27110626-27117746	CD56
SE_20972	chr1:27108865-27116964	CD8_Memory_7pool
SE_20972	chr1:27116978-27118664	CD8_Memory_7pool
SE_22451	chr1:27109274-27117931	CD8_primiary
SE_40913	chr1:27109116-27118823	Left_Ventricle
SE_42523	chr1:27116973-27118555	Lung
SE_48920	chr1:27116958-27118586	Right_Atrium

Enhancer Sequence

GCCAAATAAT AGCAACCACA ACACAGATTT GAGTAGAACT TCACACTTTG GTCTGTTTCA 60
CCATCATGAC AATTTTGTGA GATAGGAAAA AAAAAAAGTC TGCTCCCATT TTTTATATAA 120
AGAACTGAGG CTCAGAGGGA CTAATGAGAA CTTGTAAGTG ACAGAGTCAG GAGTTGAACC 180
CAGATCTTTA GTTCCTGCAG AAGTGCATCC AATAGGCTTT AAAAGATTTC TGTGACCTTA 240
GCTTTCCAGC TACTTGCTTA GCTGTATGGA ACTTTACCAA CGACAGTTCA GGGCTTCACA 300
GTGACACCTA CTGAACCCAT TTGCTGTCAA GATGCTTTCC CCTCATCTGG GAAGTTAGGT 360
GGTTGGTTAA GTTTGTCATA GTAATTCTGA GAGGGGAGGT TCCAGTGACG AATGCTTTCA 420
AGAATTTGCT TTCACTCGAT GTGTGACATT TTCCTCCTTT 460