EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS060-00550

Organism

Homo sapiens

Tissue/cell

GM12891

Coordinate

chr1:24054590-24055530

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ELF3	MA0640.1	chr1:24054778-24054791	AACCAGGAAGTGA	+	6
IRF1	MA0050.2	chr1:24054845-24054866	TCTTTCTTTCTTTTTTTTTTT	+	6.25
RARA	MA0729.1	chr1:24055067-24055085	CCTCGAACTTCTGACCTC	-	6.64

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I023726

chr1

24053079

24056171

Enhancer Sequence

CAGAGGGGGG GTTCAATAAA TATTTGAATG AATCTTTATT CCTATTTCAA GAGCGTATTT 60
CTTCTTTATT CTCTAGTTCT TGGCACAAGT ATTATTGATT TAGTTATCAG CGTATTCAAC 120
AATCACAACT CCCCACTTTG GTGAGGAAAC ACACTTTCTA GAGGTTTGCC TGTGTCCTGC 180
CCCATTCAAA CCAGGAAGTG AAAGGGGAAT CTGCTGGCCT TAAGGGAACA ATGATTCTTT 240
TTTCTTTTCT TTCTTTCTTT CTTTCTTTTT TTTTTTTTTG AGATGGAGTC TTGCTCTGTT 300
GCCTAGGCTA GAGTGCAGTG GGGCAATCTC AGCTCACTGC AATCTCCGCC TCCCAGGTTC 360
AAGTAATTAT CCTGCCTCAG CTTCCCGAGT AGCTGGAATT AGAGGTGCCT GTTACCACGC 420
CCAGCTAATT TTTGTATTTT TAGTAGAGAC GGGGTTTCAC CATGTTGGCC AGGCTGGCCT 480
CGAACTTCTG ACCTCAGGTG ATCCACCCAC CTCAGCCTCC CAAAGTGCTG GGATGACAGG 540
CGTGAGTCAC CGCGCCCGGC CTACAGTGAC TTCTCTAGAG AGTAGTTCCT TGAGGGCTGC 600
AGAAGGTCAT GCTAGTTTGA ACATAGTGGT TCCATGTGGC TGGTTTTACA TCTGTGCTCA 660
GATGATTTGT TTTTTTTTTG TTTTTTTGTT TTTGTCTTCA AGGTAGAAGA ACACTCTAGT 720
CCCACAGGCC CTTTAATCAG TACCCACTGG GGAGTATTTG TGGATGTGTT TATCAGTTTC 780
AGGGTGTCTT GACCAAGATT CAGGAGGGAG GGTATCCCCT ATGAAGATGG CCTTTTTCTC 840
TTGGCTCTCC TTCATGCACC CTTCTCAAGC CGTGCTTACA TTTCCTCTAA CACTGCAGGC 900
TCCATTGGAA CTCCAGCCCC TTTACACCTG CTGTCACCTC 940