EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS060-00370

Organism

Homo sapiens

Tissue/cell

GM12891

Coordinate

chr1:16164320-16166070

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr1:16165519-16165540

AAAAAGAAAAAAAAAGTTAAA

6.05

dbSUPER

Number of super-enhancer constituents: 15
ID	Coordinate	Tissue/cell

SE_07045	chr1:16159045-16164529	Brain_Hippocampus_Middle_150
SE_09659	chr1:16159157-16165128	CD14
SE_10503	chr1:16159866-16164586	CD19_Primary
SE_11576	chr1:16159398-16165553	CD20
SE_13503	chr1:16157416-16164524	CD34_Primary_RO01536
SE_17664	chr1:16159021-16164561	CD4p_CD25-_CD45RAp_Naive
SE_18153	chr1:16159042-16164512	CD4p_CD25-_CD45ROp_Memory
SE_20208	chr1:16159442-16164740	CD56
SE_27856	chr1:16159874-16164754	Fetal_Intestine
SE_28793	chr1:16159852-16164776	Fetal_Intestine_Large
SE_53349	chr1:16160507-16164502	Spleen
SE_60701	chr1:16157158-16178526	DHL6
SE_62015	chr1:16156216-16178176	Toledo
SE_62475	chr1:16156358-16178756	Tonsil
SE_63255	chr1:16159787-16176939	GLC16

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I015829

chr1

16155696

16165295

Enhancer Sequence

AGTCTTTAAA ATCGGCGTTC CTACGGTAAT GATACCACTG ACTACTAAAT AAGAGGAAGA 60
AAATTTGTGG CGTGTATGTT TTATAATTTG AAATAGGCAT ATCAAAGTTC TTTTGTGCTG 120
TCTAATAGGA TCCTGGAGAT GGATTTATTT ATTTATTTAT TTAGAGACAG AGTCTCTCTG 180
TGTCGTCTAG GCTGGAGTAC AGTGGCACGA ACAGAACTCA CTGTAGCCTC GACCTCCTGG 240
GCTCAATGGA TTCGCCCACC TGCAGGCGCA CCGCCACACC CGGCTAATTT TTAAATTTTT 300
TGTAGAGACA AGGGTCTTGC CTTGTTGTCC AAGCTGGTCT GGAACTCCTG GGCTCAAGTG 360
ATCCTCCCAC CTCAGCCTCC CAAAGTGTTG GGGTTACAGG TGTGACCCAC TGGTCCAGGC 420
CTGTTTGAAT TATTTACTTC AAACTACAGC TAGGTGTCTG AGAGGAGCAG CAGAAGAGCT 480
TCAAACAAAT CTGCTGAAAA TTTCCATCCA TATGTAAAAG CTACTAAACA CAATTTATTT 540
GGTATTGTTT TTGAGATTTC ATCAAATGCA GTTTGATAGC CTTCTCTGAA TTAATCAGAA 600
GTCTTGGCCG GTTTTGGTGG CTCACGCCTG TAATCCCAGC ACTTTGGGAG GCTGAGGCAG 660
GGGATCACTT GAGGTCAGGA GTTTGAGACC AGCCTGGCCA ACACGGTGAA AACCCGTCTC 720
TGCTAAAAAT ACAAAATTTA GCCAGGCGTG GTGGCCGGTG CCTGTAATCC CAGCTACTCG 780
GGAGGCTGAG GCACGAGAAT TGGTTGAACC CAGGAGGGGG AGGTTGCAGG GAGCCGAGAT 840
CGCGACGCTG TACGCCAGAC AGGGCGACGG GGGGGAGACT CCGTCAAAAA AAGAAAAAAG 900
AAGTTTTGAT TTGCGTTATT TACGTTCTGC TTGTGTCTTG ATGTTACAGA AGTTACAATC 960
TCCTAGGCCT GGGTGTTTTG GCTAATGTGA TTATCACTTA TGGTGAAACA GTTAAGCTTT 1020
TTAATAATGG AGATTACCAG TAGGGTCTTA AAAGGTTGAG TGAGGGCCTG GCACCATGGC 1080
ATTCGCCTGT AGTCCGGTGG TTGGAGGGGG AGGATCCCTT GAGCCCAGGA GTTTGAGGTT 1140
GCAGTGAGCT ATGATCCTAC CCCTGCACTC TAGCAGGAGT GAAAGAATGA CACTCTCTCA 1200
AAAAGAAAAA AAAAGTTAAA TAAAATATCT GAGTTAACAT AGAGAGTAAT AACATTTTGT 1260
TCATGTGGGA TTTGTTAATA TATATGTAAT TTAATGCAGT TAACTATCAA CATTTCAGGG 1320
GAACCCTTAG CTAAAGTGAC CCAGATGCTG ACTTCCAAAA GTCATTTATT TTATTTTTTA 1380
TTGTTTTGAG ACGCAGTTTT GCTCTTCTTG CCTAGGCTAG AGTACAATGG TGCAATTTTG 1440
GCTCACTGCA ATCTCTGCCT CCGAAGTTCA AGCGATTCTC CTGCCTCAGC CTACTGAGTA 1500
GCTGGGATTA TAGGCATGCA CCACTAGGCC TGGCTAATTT TATATTTTTA GTAGAGATGG 1560
AGTTTCTCCA TGTTGGTCAG GCTGGTCTTG AACTCCCTAC CTCAGGTGAT CCACCTGCCT 1620
TCGCCTCCCA AAGTGCTAGG ATTACAGGTG TGGGCCACCG AGAGCGGCCC AAGTCATTTT 1680
ATTATAACTT TTTAATTTCA GATTATAAAA GCAATACCTG ACAGGGCTTG GTGGCTCACT 1740
TCTATAATCC 1750