EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS060-00150

Organism

Homo sapiens

Tissue/cell

GM12891

Coordinate

chr1:6659510-6660160

Target genes

Number: 14
Name	Ensembl ID

RNF207	ENSG00000158286
RPL22	ENSG00000116251
ICMT	ENSG00000116237
TNFRSF25	ENSG00000215788
PLEKHG5	ENSG00000171680
RP11	ENSG00000229519
NOL9	ENSG00000162408
TAS1R1	ENSG00000173662
ZBTB48	ENSG00000204859
PHF13	ENSG00000116273
KLHL21	ENSG00000162413
THAP3	ENSG00000041988
DNAJC11	ENSG00000007923
CAMTA1	ENSG00000171735

dbSUPER

Number of super-enhancer constituents: 22
ID	Coordinate	Tissue/cell

SE_04553	chr1:6658786-6663024	Brain_Anterior_Caudate
SE_07317	chr1:6659027-6665174	Brain_Hippocampus_Middle_150
SE_09798	chr1:6658598-6665201	CD14
SE_15124	chr1:6659045-6665168	CD4_Memory_Primary_7pool
SE_19050	chr1:6658603-6665131	CD4p_CD25-_Il17-_PMAstim_Th
SE_19297	chr1:6658880-6664820	CD4p_CD25-_Il17p_PMAstim_Th17
SE_21108	chr1:6659182-6665098	CD8_Memory_7pool
SE_24407	chr1:6659765-6660055	Colon_Crypt_2
SE_26672	chr1:6658859-6665356	Esophagus
SE_30037	chr1:6660076-6665829	Fetal_Muscle
SE_36216	chr1:6658652-6665086	HMEC
SE_40051	chr1:6659129-6664881	K562
SE_40857	chr1:6658849-6665628	Left_Ventricle
SE_42593	chr1:6658924-6665759	Lung
SE_48309	chr1:6658831-6665412	Psoas_Muscle
SE_48826	chr1:6658868-6660068	Right_Atrium
SE_50723	chr1:6658991-6660193	Sigmoid_Colon
SE_51326	chr1:6656436-6665828	Skeletal_Muscle
SE_53559	chr1:6658837-6665348	Spleen
SE_54804	chr1:6659286-6665727	Stomach_Smooth_Muscle
SE_58743	chr1:6616886-6664806	Ly1
SE_64785	chr1:6658809-6662937	NHEK

Enhancer Sequence

ACCTGCCAGG ACGCATGACA GGCAGAAGAT CAGCCCACTC AGGTGAGTCA CCCACCTGCA 60
CCCTCCCGAA CTTCCGCAAG GGCCTCTGCC TTGGGAGGAA TTAACATCAC TGGGCTTCAC 120
CCCAGACGCA CACCCTCTCC CCAAAAGCCC AGGCCACATG TTGTGGCTAA GGCAAAGCAC 180
ACGCTGACCA CTGTCCAGCG AGATGACTGC TGCCAAGCCT CTACCAAACA AAGGTCCTGA 240
GTGCAATGCT GGAAGAATCC AGCAGCCTCC TCTGGACACC GCCCCCCAGC CATACATACA 300
CCTCAGCAGA CCAGAGCCCT GGGCCTTGGG ACAGTTCTCC TGGGGAGCCA CAGAGCTTGT 360
CAGCAGGGCA CACAGGGACT TGCTCACTAA CTCCTAGGCT TCCTGGGCAC CCTCCAAGCA 420
AGGTTCTGCC AGGACAAGAT GAGCGGAAAC CCACTTCCTG CTTTAAGCAA GAGACCTAAC 480
GCTACACTGC GAGGCCACTT CTCGATTCTG GTGCAGGTTA CAAAGCTGTG TTTGGTTTAG 540
AAAAATCCAC GAAGCTGTGT AAGTATAATA TATATATATA TATTCTTCTG CCTGTATTAT 600
TATTATTATT TTTGAGACAG AGTCTTGCTC TGTCACCCAG ACTGGAGTGC 650