| Tag | Content |
|---|
EnhancerAtlas ID | HS059-40360 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr6:52253170-52257040 |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF1A | MA0046.2 | chr6:52254495-52254510 | AGTTAATGTTTAATT | - | 6.56 | | JUN(var.2) | MA0489.1 | chr6:52255377-52255391 | AGGAAGTGACTCAC | + | 6.15 | | Lhx3 | MA0135.1 | chr6:52255573-52255586 | TAATAATTAATTT | - | 6.25 | | Zfx | MA0146.2 | chr6:52256899-52256913 | GAGGCCTAGGCGGG | - | 6.24 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_03340 | chr6:52253085-52255876 | Brain_Angular_Gyrus | | SE_03340 | chr6:52256274-52256914 | Brain_Angular_Gyrus | | SE_04214 | chr6:52253002-52256108 | Brain_Anterior_Caudate | | SE_04214 | chr6:52256220-52257204 | Brain_Anterior_Caudate | | SE_04963 | chr6:52250679-52259985 | Brain_Cingulate_Gyrus | | SE_06207 | chr6:52251162-52257636 | Brain_Hippocampus_Middle | | SE_06960 | chr6:52252878-52258020 | Brain_Hippocampus_Middle_150 | | SE_08050 | chr6:52250972-52259364 | Brain_Inferior_Temporal_Lobe | | SE_12385 | chr6:52253060-52257034 | CD3 | | SE_16054 | chr6:52253695-52256439 | CD4_Naive_Primary_7pool | | SE_17578 | chr6:52252868-52267051 | CD4p_CD25-_CD45RAp_Naive | | SE_19089 | chr6:52252884-52266905 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_21851 | chr6:52253151-52257043 | CD8_Naive_7pool | | SE_58572 | chr6:52147442-52265048 | Ly1 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 6 | Chromosome | Start | End |
| chr6 | 52254120 | 52254219 | | chr6 | 52254281 | 52255602 | | chr6 | 52255784 | 52255834 | | chr6 | 52255964 | 52256018 | | chr6 | 52256000 | 52256891 | | chr6 | 52256380 | 52256793 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH06I052388 | chr6 | 52253119 | 52256859 |
|
Enhancer Sequence | GTCAGGAAAA AAAAAAAAAA GCAATAAATG TAATGGGTTT GAATCATCAT GAAACCATAC 60
TCCTCAACCC CCAGCCCCCA TACGTGGAAA AATTGTCTTC CATGAAATTG GTCCCTGGTG 120
CTGAAAAGGT TGGGGACCAC TGACCTAGAT GAATGCCTAG ATGAATGGTA TTACTGCCTT 180
TATAAAAGAA ACTCAGGAGA GCTCCCTTGC CTCTTCTGCC ATGTGAGGAC ATAACAAGAA 240
GACAGTCATG TTTGAACCAG AAGTGGGCCC TCACTGGACA CCAAATCTGC TGGTGCCTTC 300
ATCTTGGACT TTTGCAGCCT CTAGAAACTG TGAAAAATAG ATTTCTGTTG TTTATAAGCC 360
ACCTAGTCTT TGATATTTCC TTACAGCACC CTGAATGGAC AAAGACAGAG GGCTTAATAA 420
GACATGATGA GTTCTACTTC AGGCTGTCGC TAAGCTTCAC AGGGGAGGGG TTATATCTGA 480
GCCTGAATTT GAGAGAGAAG TGGGTTTTGC CAGGCACAGC AGGCTACAAT AACATTGGCG 540
ATGTCAAGTG TGTGGCTTGT TCAGGCAATC AGGACAGTCT GTTCTGCCTT TTGTATGCAA 600
CAAGAATAAA AACGAGTTCT AACAGTGCTC CAGTGTTATT TTACATTATG TTTCTCTGCC 660
TGGCCCCTCC TTTTCCTAAG TCTTTGCTTA GGCATTCTTG GTCATAAAAA TGACAAATGG 720
TAGGAGATGA TAGACCAAAA ACAAGCTGAT GGTTAGAAAT TCAGCCAGCA ATTTAAATAT 780
TGGTGCGGAT ACCTAGCAAG TGGATGAACC ACACAAATAA ATAAGATCCA ACTCAAATGG 840
TGTTTTCTTT TGAAAACCCA CATTTTCGTT TTCTTAGATC TCACTGGTTT TTACCTTTAG 900
AAGCAGGCAA AGGATAGTCA TTCACTTTGT TTTTGAACAA TGATCTATTG ACACATTCTG 960
GGGACATCTT TCCTCTGACT GTTTGCTGAT AGAAATAAAG CATAGGTAAG CCAGTGTTCC 1020
TGTCTCCAGA GGCTTGCAAT TCAATAAGCA GAAGAGAGAA GGCTCTCTAC ACACACAGTA 1080
GTGAAGTAAT GGGCAAGCCT GATGTTCTCC TTACCAAAAT ATGTGGAATA GATAGATAAG 1140
GGTTGGGGGC GGGGGAGGAA TCAAGATGGC CTGGAGAAGG CTTTGTGGTG ATTTGGAATT 1200
GAACTAAGGC CTTGGAGATA TCTAAGGAGA AATGAAGAAT AAAGTGACTT GCTTGACTCT 1260
TTATAGCAAA TAAAATTGCT GGGTCTTAGA ACCACCAGGA GAGTGTACTG TTGTCACTGC 1320
AGAAGAGTTA ATGTTTAATT GCTAGGGAAC ACAGCTTTCT TTATATGGTG CTCCAAACTC 1380
TAGCTCGATT TGTTATCTGA TTTTCTGCTG TGGAAAGGGC ATTTCCAAGA TTGATTTCCT 1440
GCCAGTGGAA ATGAGCAGCT CTCTTCACGT TCACCCGGGT TGGCCCGGGT CCCAGCTGGT 1500
TTGCAGATCA GTGATGAAGC TTCCTGCCGG TGAGAAGCTA GATCTAGTTG AGAGGTTGCC 1560
TGACTGAAGC CAAACCACAC CTAACGAAGC CGATAGTTAC ACTCATGTAG AAAGTCCAGG 1620
GAGACACCTG TCCCTAGGCT TTAATTAGTG GGAGTTTCAG ACAGCAAAGT TTACCTTTAC 1680
TCAAACAAGA AGCCTCAGAA GAACATGATC TTCACACCTG AACTGTTGAT TGCCTGGAGA 1740
CTGCTCAGTG TGTTCTCCCA GTAAATTGTT CCCAGCTCCT CTGACTTCTC CCACTCGACA 1800
GATTAAACAC AGATACTATT TATTCCATGT GGCAGATGCA TTCTCTGTCT GTAATGATGC 1860
ATTTTGAAAC CAGTACTTTC TCAAGTGAGA TTAGCTGAGA TGTGGAAAGT ATAGGAAGTG 1920
ACAGAACAGA CAGAAATTCT AGCTAGAGGG TTCTAGTTAG ATAAAGAGAA AAAGGCACTC 1980
AGAGGAAATT TGCTCTGCTC ATCTTTCCCA GGGCACAGCA ACAAATTAAG GCTGTCTTTT 2040
CTTTCTCCTC TTAGGAATAT TATAGGGCAC CACAGAGGAA AAGATTCATA AGTGGAGAGC 2100
TCACTGAGCC CAGAAGGACA CATCTTGCTG CCAGATCTGT GGCAAAAAGG TGTACCTTAC 2160
TTTTTTTTTA TAGGCACGGT TCAGCCGTAC CACAAACCCA CATGGTCAGG AAGTGACTCA 2220
CGTATTAATG CCGTTTGAGT TTGTGTGCTG TGGGGAAGGT CTTTTGACAA TATTGTGTAT 2280
ACTGGCTTTT CCAATCTAAG AGAACATCTT TGCTGCATTA ACAGTAGATG TTACATATTT 2340
TTTTCCCTTT AAACCCCCCA TGACCAATAG CTTACCCTAT GGCAAGTATA GTTAGGTTAC 2400
TCGTAATAAT TAATTTGGTA TGCTAACTAG TTGAGCTCAC AGAAAAATGC AAGTATGGGT 2460
GTATTCCTTT ATAATGCTGG GGTGTTTCTT GGGGAGGGTC TTAATATTTT ACCAACTTAG 2520
GTTTTACCAA TTTTTGCATA TTTATGTCAA ATATTCCTAT TTGCAGAGTA GTACTAACTT 2580
TTGCTTTCCA ATTACAAAAG TAGTAAATGT TTGTTGTTAA AAAGTACGAT AATGATAGTA 2640
TTTCCAGAAG AAAAGTAAAA TTCCCCACAA TCCCTTCATG GCAATAGCTA TATTGTTTTG 2700
ATTATATGCA CTTCCATACT TCATCTGTAC CATGTTTGTA TGATTACAAA AATAGGGCTG 2760
GGCGGAACAC ATACTTTAAA TTTGTTTTTT CCTTTACATG TCTTTGACTC ATTTATTCAT 2820
TCAAGAAATC TTTTTTGAGA ATGTACAATG TGCTAGTCCA TCACTTTTCT AAGTGCAGTG 2880
GAGACTACAG TGAAAAACCA ATGGAGCTCA CATATCATGT GTATCTTTGT ATAACAATAA 2940
ATGTAAATAT GCTAGTTATT TTAATAAGTG CATAGTATTC TATTTTATAG ATTTATCTTA 3000
ATTTACACAA TCAAATACTC CATTTTTGGA TGTCGAAATT CTGTTTGTTA GGTTTTGTTA 3060
AATATAGGGA GGAAATATGC ACTGACCATT GGTGAATCTG AATCGATGTT CAAATGATCT 3120
CTGCTAATAA CAGGATTGCA CTGGTAGTGC CATTCTTTCA AATATGACTT TACAAATAGT 3180
GATATGCTCC TTGGAAGATG TAGCTATAAA GATCAGTATG AGCCCAGAGT TCTCTCACTT 3240
AACGACTATG GAGATCCTGA GGCATGTGAG ACTGTTTCCA ACTCCACCTC TGGCTCAAAG 3300
GCTGCTTAAA GCACAGTTCC AGTCCTTATA AATGGACACC AAGTTGTCAT TTTGGCTGCT 3360
ATTCCTTTGC AGCCATTTAT AATTATGCAG TGATGTGTGA AGCTGGGCTT CTGTGAATTC 3420
TGGAAGCATT TCTTTTGCCT TTGATAGGAA TTGCTGCTCA TTTGTCCTCT ATCCAACAAC 3480
CAGCAGGTCA CTTTCCTACC ATCTGTGTGA GTCCCACACA CAGTGACATG AAGTGATGTC 3540
ACAGGATCTG TTTGTTGGTG ATTCCAGCAT GCTGCTTGAT GTTCAGTACA AAGCAAAACA 3600
TAGCCCAGAT GAATTACAGA ATTTTACAGT ATTAGAGCTT ATATAGATTA CACCCCCATC 3660
TTAAGGACAA GGGCACCAAG GCATAGAGAG GTTGAATAAT TTGCTTAAAA ATCACTTAGA 3720
GCACTTTGGG AGGCCTAGGC GGGCAGATTG CCTGAGCTCA GGAGTTCGAG ACCAGCCTGG 3780
GCAACACGGT GAAACCCCGT CTCTACTAAA ATGCAAAAAA AACTAGCTGG GTGTGGCAGT 3840
GTGCGCCCTT AGTCCCAACT ACTCGGGAGG 3870
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