EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-40213

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr6:43223700-43225540

Target genes

Number: 21
Name	Ensembl ID

RPL7L1	ENSG00000146223
C6orf226	ENSG00000221821
PTCRA	ENSG00000171611
CNPY3	ENSG00000137161
RP3	ENSG00000231113
RPL24P4	ENSG00000181524
PEX6	ENSG00000124587
PPP2R5D	ENSG00000112640
MEA1	ENSG00000124733
KLHDC3	ENSG00000124702
RRP36	ENSG00000124541
AL136304.1	ENSG00000240625
KLC4	ENSG00000137171
CUL7	ENSG00000044090
MRPL2	ENSG00000112651
PTK7	ENSG00000112655
SRF	ENSG00000112658
CUL9	ENSG00000112659
C6orf108	ENSG00000112667
CRIP3	ENSG00000146215
RP11	ENSG00000219222

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HES2	MA0616.2	chr6:43224015-43224025	GGCACGTGCC	+	6.02
HES2	MA0616.2	chr6:43224015-43224025	GGCACGTGCC	-	6.02
Nr2f6(var.2)	MA0728.1	chr6:43224260-43224275	GAGGTCAGGAGTTCA	+	6.22
POU2F2	MA0507.1	chr6:43225361-43225374	TTGATTTGCATAT	+	6.87

Enhancer Sequence

AAGCCTCTCC CCTTGGTCTT CTAACTGCAC TAAAGGCATG TATGCTCTTG TAAACTAGTC 60
ACAGCCAAGA TTTATCAAGA GCTTACCCTG TTCTCAGTGC TTTTCATGCA TTCACTCATT 120
TAAGCTTCCA AGCAAGCCTT TGATGATGAT GAATGCTCCT TATATTATTA TTCCAGCTCT 180
TTTTTTTTTT TTAGACATAA TCTTGCTCTG TCACCCAGGC TGGAGTGCAG TGGCGTGATC 240
TCTGTTCACT GCAACCTCTG CCTCCTGGGT TCAAGCAATT CTTCTGCCTC AGCCTCCCGA 300
GTAGCTGGGA CTACAGGCAC GTGCCACCAT GCCCGGCTAA TTTGTGTATT TTTATTTGAG 360
ATGGGGTTTC ACCATGTTGG CCAGGTGAAC TCAAGCTCCT GACCTTTTGA TCCACCTGCC 420
TCGGCCTCCC AAGGTGCCGG GATTACAGGT GTGAGCCACT GTGCCCAGCC CCAGCTCTTA 480
ACAATTAATG AAGCTGGCCG GTGCGGTGGC TCACACCTGT AATCCCAGCA CTTTGGGAGG 540
CCGAGGTGGG CAGATCACTT GAGGTCAGGA GTTCAAGACC AGCCTGGCCA GCATGGTGAA 600
ACCCTGTTTC TACTAAAAAT ACAAAAATTA GCCGGGTGTG GTGGTGGGTA CCTGTAATCC 660
CAGCTACTCA GTAGGCTAAA GTGTAAGAAT CGCTTGAACT TGGGAGGTGG AGGTTGCAGT 720
GAGCTAAGAT TAAACCACAG CACTCCCGCC TGGGTGACAG AGCAAGACTC CATCTCAAAC 780
AAACAAATAA ACAAAAACAA TTAATGAAGC CAAATGCTTT TAAGTACTTT ACATGAAAAC 840
TCTGCGGGAG GCAAGTGGGA TGATCATGCC CATTTCATAG ATGAGGGAAC TGAGGCCCAA 900
TATAGTGGTT AGGAGCAGGG CTGGGCTCAG GCACATCTTC TGACTCCGAG TCCAGGGCTC 960
TTTCCAAGCG TCCATCACCA CACCCCATGG GACCCACTGA CCCTGATCAG AGAATGGGGG 1020
AAACATCAGC AGTGTTCTGC CTGGGATCCA CTACACGCCA GGCACGATGC TGCATACTGT 1080
AGGAGTAGAG ACAGCCTGAG GCACACAGGA TGCACTCAAT TAAGCCGGTC CTCTCAGCAG 1140
AGAGAAACTG CCCTGTGCTC TGGAGACAGC CAAGCCAGAA GTGGAGTGTT CTGGGGACCT 1200
CAGAGGGTCT ATAGCTGTCT GCCACCTCCT GAACCCAGGG CCTGGCAGAG ACGCCCCCTG 1260
ATCTTGGCTT AGCCTCATGG GATCCCCAAA GCCACACAGC TGCGAGCACC CCCCAGGCTG 1320
GGGCCCTGTG CTGGCTGCTA GGGATGCAGA GTTGACAGAT AGGCATGTGG ACAATTCAAA 1380
CTGATGCACT GTGCCCTGTA GGGCAGCTGT ATGGTGGAGA GAATTTACGG TGAAGAGAAG 1440
GGAAGCTGCA GAGAGGAGAG GATGAGTGGG AGGGGCGCCC CAGCAGAGGG GCAGTCTGTG 1500
CAGAGGCAGC ACCCCATGCA TGGGTTTGGA AACTCCCAGT GGTTTAGGGT TGCTGACATG 1560
GTGGAAATGG CAGAGGAGGT TTGAAGATGG TAACCAGGGG ACAGATCTCA GAGGGTTCAT 1620
GTCCAGTCAG TGGGGCTTAA TCCAAGATGA TAATTTGCAT GTTGATTTGC ATATCATGTG 1680
CATGTTTTCA TTTAAAATCA ATGTGCCGTT CTCCTTCCAA TGCCCCCTCC AGGCCCATTC 1740
CTGTCCTGGA AAGTCCCTGT CTTCCTCCTA TGATCCCAGC AACTGCCCCT TCCTCCTGGC 1800
TAGCCCCCGG ATCACCTCTC TGTCCTCCCA TCACCCTCAC 1840