| Tag | Content |
|---|
EnhancerAtlas ID | HS059-31172 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr3:4752160-4753440 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr3:4753241-4753260 | TTACCAGCAGGTGTCACTA | + | 6.67 | | GFI1 | MA0038.2 | chr3:4753232-4753244 | TGCTGTGATTTA | - | 6.27 | | Gfi1b | MA0483.1 | chr3:4753232-4753243 | TGCTGTGATTT | - | 6.62 | | SOX10 | MA0442.2 | chr3:4752360-4752371 | TGCTTTGTTTT | - | 6.02 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_04502 | chr3:4752935-4754236 | Brain_Anterior_Caudate | | SE_27942 | chr3:4753013-4756723 | Fetal_Intestine | | SE_28801 | chr3:4752968-4757254 | Fetal_Intestine_Large | | SE_33812 | chr3:4753163-4754478 | HCC1954 | | SE_56189 | chr3:4752764-4755171 | u87 | | SE_67656 | chr3:4752764-4755171 | u87 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I004711 | chr3 | 4752946 | 4756476 |
|
Enhancer Sequence | AGCGGCCTCT CTCTCTGGGG TGTTCATTTG CCAGAACCTT GATGACCTCA CAAAGCTTTT 60
GTTCCCGAAG AAGGAGACGT TGTCCTGTTT TTTAACTTTG ATGAATGCAA GGTCATGTGC 120
TAAAGTCCTG TTCTGACCTC CCCAAAGTAA GTTTGTCTAT TAAATCCTGC TTACTGACAC 180
TTTTTTGTTT TGTTTTGTTT TGCTTTGTTT TTTGGTGAGA AGTTCTTATT TTCACTGCAT 240
GCCCATTCAT TCATTCATTA CAGTGCACCC ACCGTGTGCT GTGGTACAGA CATAAAAAAG 300
CCATGATCCC TCAGCCCTCA GAAATCTCAG ATCTATCGTG ACCTCACCAT CTTTTCCTAA 360
TAATTTTGTA ATTTCTTAGT TTATGCCTTG TGCGTAATCT GTAAGCAACA AGCAGACCCA 420
TGGTTAGAAA TCTCCATTAG ATTTTTGCCC CAAGGCCGGA CACGGTGGCT CATGCCTGTA 480
ATCCCAGCAC TTTGGGAGGC CGGGGCTGGT GAATCACCTG AGGTCAGGGG TTCAAGACCA 540
GCCTGGCCAA CATGGTGAAA CCCTATCTTG ACTAAAAATA CAAAAATTAG CTGGGCATGG 600
TGGCGGGCTC CTGTAATCCC AGCTACTCTG TGGCTGAGGC AGGGGAATCA CTTGAACCCA 660
GGAAGCAGAG GCTACAGTGA GCCAAGATCG CGCTACTGCA CTCCAGCCTG GGTGGCAGAA 720
CGAGACCTTG TCTCAAAAAA AAAAAAAAAA AAAAAAAAAG AGATTTTTAC CCTAAGATTA 780
GTTGTTTGTT TAGCTTGGGG CTGGACTCTG CATGTGAGTT TCTTACTTTT CTGGGCCCCT 840
CTAAGGACAA GCTTGTGCAT AAGGGAACTG TGTGTATTGG CCTCAACCAT CATCCTCATG 900
AGTTGTTTTT GTTTTACAGT GTTGGCATAT TTGACCCATT TTACTGGCAA TTCTCAGTGG 960
ATAAATAGCC ACGCTTTATA AACGAGCAGG TCTGAGTGGA CCTCTGTCTC GGTTCTCCTC 1020
TCCATATAAT CTCTCCATTG TATGTGGCTG ACTCCTGCCC AGTGAGCCTG TTTGCTGTGA 1080
TTTACCAGCA GGTGTCACTA TTGAGACACA GTTGCTAACT GGCTGTTCTC AGTGCAGGGA 1140
ATGCCCTGAA GTATCTTTAA CCTGAGAGCT CTTAATAAAT ATTTGTTCAT TAACGGACTA 1200
GTTAAAATAA ATTGCTTGTG AAGTCTTTTT AATTTAAAAT TAGCTTCAAG GAAGTAATCC 1260
GTGGTTTTCC CCCCATTCAG 1280
|
