| Tag | Content |
|---|
EnhancerAtlas ID | HS059-29148 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr20:48687600-48689110 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr20:48687975-48687994 | TAGCGCCCTCTGCTGGCCA | - | 9.57 | | Foxd3 | MA0041.1 | chr20:48689082-48689094 | GTTTGTTTGTTT | + | 6.32 | | IRF1 | MA0050.2 | chr20:48687732-48687753 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 |
|
| | Number of super-enhancer constituents: 1 | ID | Coordinate | Tissue/cell |
| SE_56859 | chr20:48687724-48688073 | VACO_400 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I050070 | chr20 | 48687516 | 48688570 |
|
Enhancer Sequence | CACTTGTAGT CCCAGCTACC CGGGAGGCTG AGGAAGGAGA ATCGCTTGAG GCCAGGAGTT 60
GGAGGCTGCA GTGACCCGTG ATCGCATCAC TGCACTCCAG CCTGGGCGAC AAGAGACCCT 120
GTCGCAAAAA AAAAAAAAAA AAAGAAAGAA AGAAAGAAAG AAAAAGGGTT GGAAGCGCAC 180
TGGGGGAAAA AGCTTGCCCA CTCCGCTTTG GGAGCCTCCA GCAGGCTCCC GCTGTGCCAA 240
AGGCACACAC CCAGATGTCC GGTGGTCCAC CCCTGCCCCG GCGGTCACGC CTGTCCCCTC 300
CTCCAGCCCC AGCCTCGGGT CGGCTGAGAG ATGACGCGTG GCCCGGCCCA GCCGGAGCGT 360
TGGTCCCTAG AGCGCTAGCG CCCTCTGCTG GCCAAGGGCG GGCGTGCAGG CCCGAGCCAG 420
AACGGGGAAG CCGGGCGCCA GGAGAGCGGG GAGGAGCTTC ACTCTTCTGG TCGGTGAGAT 480
GGGGAAGAGC AATAGCGAAT ACATAAGCAG AATACACCGA AAGGAAAGGA AAGAACAATA 540
GCGAAATAAC ATTTACGGAG GGGTGCTCCG TGCCGAGGAC TGCAAGAAGC CCACACCATG 600
TAAAACCACA CGTAATCCTT AGAATAACCC GGCGAAATGG CAACGGAAAC GCACAGAGAG 660
GTTAAGGAGC CCTCCCGGGG CCACACAGCT GGTAGTGGAA ACGGCTGACT CCTGGGCCTG 720
CACTGGCATC CACCGAGGCG GAGAGAGGAT GTGAAGGTGT CACCTCCGCT CATTCACTCA 780
TGCATGGCCT TCCAGCCAGC CATTCACCCA TTCACAAGTA TTCACTGAAC ACCTACTGTA 840
TGCCCAACAT TGTGTGAGAT GGCAGGAACA CAGCCGTGAA CACAATTGGC CTCATCCCTA 900
CCCTCTTGAA GCTGACATTT TAGTGGGGGT GGGAGGGGGC AGATAATAAA CATGAATATA 960
TCATTAACAG CTGGGCCAGA GGCCAAAGGA TAAACCTGTA TGCGCTCGCT GATGTTACTC 1020
AGGCTCCTAC CCCAACATGA TTTTTTGCCG CATCTGAGCC CTACCTGTAC TTTTACTTGA 1080
CATTTGCTCC TAGATAATTG GTTTTTACTT AAGTGTATAT ATATATGTGT ATATCTATAT 1140
CTATATCTAT ATCTATGTAT ATGTTTATTT ATTTATTGAG ACAGAGTCTC GCCGTGTTGC 1200
CCAGGCTGGA GTGCAGTGGC ACAATCACGG CCCACTGCAA CCTCCACCTC TTGGGCTCAA 1260
GCGATCCTCC CACCTCAGCC TCCCGAGTAG CTGGGACTAC AGGTGTGCAA CACCATGCCC 1320
AGCTAATTTT TGTATTTTTT GTAGAGAGGG GGTTTTGCCG TGTTGCCCAG GCTGGTCTCA 1380
AACTCCTGGA CTCAAGTGAT CTGCCCACCT TGGCTTCCCA GAGTGCTGGG ATTACAGGCA 1440
TGAACCACTG TGCCAAGACA AAGTTGCTGG GTTTTTTTTG TTGTTTGTTT GTTTTTTGAG 1500
ATGCAGTCTC 1510
|
