| Tag | Content |
|---|
EnhancerAtlas ID | HS059-28452 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr20:21483510-21484970 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr20:21484769-21484790 | AGAAAAAAAATGAAACAAAAC | - | 6.19 | | SOX10 | MA0442.2 | chr20:21484785-21484796 | AAAACAAAGCA | + | 6.02 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_05518 | chr20:21482973-21495567 | Brain_Cingulate_Gyrus | | SE_06473 | chr20:21482625-21495659 | Brain_Hippocampus_Middle | | SE_07179 | chr20:21483114-21499194 | Brain_Hippocampus_Middle_150 | | SE_65486 | chr20:21484736-21501320 | Pancreatic_islets |
|
Enhancer Sequence | TTAGTCTCCA TGTCCCTCAC TACGTAGTTC CCTGTGCTAA CTGCCTCCTT GCAGCCCAAA 60
AACTCTACTT AGTACAGAAG GACGCATCAA CAATGGACAT TCCCAAGGAA CACATGGGGA 120
AAGAGGCCAT TAAAATAGGC CCTGAAGTCA TGAGTGACCT CTGGAGACCA ATGCTAGGTC 180
TAAGATAAAG GCAGAGTAAC AGCTCAAGTG TCTGTGTCTT TGGGGTCCCC CAGATGCAGA 240
CCCTGAGACA AAGATTCATG TGCAAGTAGT TAATGGGGAC CAACAAGGAA ATGGAAAAAT 300
GAGAAAGTGA AGGGAAAAAG AATCAACACG AGAGGTGGTA ATGAGAAGAT TGCCACTGAA 360
GACAACTAGG GCTCAGTCCC ACTGGGGGCC TGTGGGAAAT GGCGAACATG TCTCAGGGTT 420
GTTCCACCTG GGGCCAGGAA GCTGGGCCAT ATATCCTGCA ACCTCCACCT GAAACTGCGT 480
GAAGACCATG AACTCCCCAG CCCTAGCCAC CTGTCTAATG GGCCCAGCAC CCTCCTGCTC 540
ACCTCCAGGC AGAGACTTGC AGATGCTGGC AGCGGGAAGC CAGCACAAGG GAAAAGGGAG 600
TGCACAGGGG CTGTGGGCAG TGGCTGCATT CTGCGGCAAG CTCTGCCTCC TCCCCTGAGT 660
CACAGAGCAG GAGTTCCAAC CACAGCTCTC TCTGCTCAAA GCAGCTGGCT GTTCACTGGG 720
TGAAAAGGAC TGCTGATTTC TGAGCGATGC CTTGTGGTCA GACCATCAAG TATCAGATCC 780
TCTGTCACAG ACACAAAAAG CTGATTCCTT TTGTTTTACC TTCTACATCT AACTATCCTT 840
CATTTCATAC CCATTCCACA CAATTCATCT TACCCTACAG AGGCTGATGG GGTAATTCTT 900
TTATTTTGTA GCTAGTAAAG AAACATGGAG AGATCTGGAA GTAGATACTT AAGTAAAATT 960
CCTTTTAATA ATTCTTGTGG TTAGACACAG TGGCTCACAT TTGTAATCCC AGTGCTTTGG 1020
GAGGCCAAGG TGGGAGGATA GCTTGAGGCC AGGAGTTTGA GACCAACCTT GGAAACACAG 1080
TGAGACCACA TCTCTACACA AAAATAAAAA ATAGCTGGGC ACGGTGGTGC CTGCCCGTGG 1140
TCCCAGCTCT TGGGAAGGCT GAGACAGGAG GCTCTTTTGA GCCCAGGAGT TCAAGGCTGC 1200
AATGAGCTAT GATAGCATCA ATGAACTACA TCCTGGGTGT CAGAGCGAGA TCCTGTCTCA 1260
GAAAAAAAAT GAAACAAAAC AAAGCAAAAA GTTGCAAATC TCTCAGATTA GGGAGCCCAA 1320
CACTATGCAC AGAAGAACAA GTTAACTTAT TTTACCTTTT CCCCACATTA GGCAAAAAAG 1380
TAATCATTTA ATTAAAGCAG TAAGATCAAT TGGCTACTGA AAAATCTATT TTTTGGTACA 1440
CATTATCATC CTGGGGGGAG 1460
|
