Tag | Content |
---|
EnhancerAtlas ID | HS059-24947 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr2:43420040-43422810 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr2:43422786-43422804 | CTTTCTTTCTTTCCTTCC | - | 6.95 | EWSR1-FLI1 | MA0149.1 | chr2:43422790-43422808 | CTTTCTTTCCTTCCTTCC | - | 8.46 | Gata4 | MA0482.1 | chr2:43421880-43421891 | TCTTATCTCCC | + | 6.62 | PAX6 | MA0069.1 | chr2:43421205-43421219 | CCCTCATGCGTGAA | - | 6.06 | RARA | MA0729.1 | chr2:43420740-43420758 | CACTGACCTGCTGACCTT | - | 6.26 | TCF7L2 | MA0523.1 | chr2:43422153-43422167 | GTCCTTTGAAGTTT | - | 6.1 | ZNF263 | MA0528.1 | chr2:43422786-43422807 | CTTTCTTTCTTTCCTTCCTTC | - | 6.02 |
|
| Number of super-enhancer constituents: 37 | ID | Coordinate | Tissue/cell |
SE_03102 | chr2:43421033-43422155 | Bladder | SE_11879 | chr2:43418911-43423261 | CD3 | SE_13409 | chr2:43420281-43422935 | CD34_Primary_RO01536 | SE_14384 | chr2:43419736-43423391 | CD4_Memory_Primary_7pool | SE_16107 | chr2:43418889-43423186 | CD4_Naive_Primary_7pool | SE_16950 | chr2:43419718-43423194 | CD4p_CD225int_CD127p_Tmem | SE_17323 | chr2:43418298-43424856 | CD4p_CD25-_CD45RAp_Naive | SE_17875 | chr2:43418720-43423486 | CD4p_CD25-_CD45ROp_Memory | SE_18565 | chr2:43418586-43425101 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19552 | chr2:43419045-43424825 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20901 | chr2:43419730-43423348 | CD8_Memory_7pool | SE_22349 | chr2:43418758-43425198 | CD8_primiary | SE_23059 | chr2:43418495-43422765 | Colon_Crypt_1 | SE_23724 | chr2:43419841-43422740 | Colon_Crypt_2 | SE_24685 | chr2:43419715-43422905 | Colon_Crypt_3 | SE_25333 | chr2:43419730-43423364 | DND41 | SE_26374 | chr2:43419705-43422902 | Duodenum_Smooth_Muscle | SE_26557 | chr2:43421228-43422781 | Esophagus | SE_27617 | chr2:43418343-43423099 | Fetal_Intestine | SE_28536 | chr2:43418392-43423198 | Fetal_Intestine_Large | SE_30898 | chr2:43419713-43423304 | Fetal_Thymus | SE_31392 | chr2:43419752-43422761 | Gastric | SE_34919 | chr2:43422110-43423362 | HeLa | SE_40066 | chr2:43420058-43423419 | K562 | SE_42201 | chr2:43419809-43422274 | Lung | SE_49954 | chr2:43419904-43422270 | RPMI-8402 | SE_49954 | chr2:43422272-43422938 | RPMI-8402 | SE_50052 | chr2:43418452-43423001 | Sigmoid_Colon | SE_52337 | chr2:43418468-43423283 | Small_Intestine | SE_53288 | chr2:43420099-43422793 | Spleen | SE_58412 | chr2:43352450-43425007 | Ly1 | SE_61450 | chr2:43354337-43468354 | Toledo | SE_62203 | chr2:43354169-43468733 | Tonsil | SE_65350 | chr2:43419451-43422721 | Pancreatic_islets | SE_66787 | chr2:43420870-43422147 | Jurkat | SE_66787 | chr2:43422197-43422944 | Jurkat | SE_68698 | chr2:43421113-43422308 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr2 | 43421229 | 43421631 | chr2 | 43422005 | 43422472 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I043190 | chr2 | 43417290 | 43424879 |
|
Enhancer Sequence | AAAGGCCAGC TCCATGCCCA CCTCCTCCAA GAAGCGCCAG CTGCTGCCCC CAGGCCAGCC 60 TCCACCTGCT CCCACAGGCT GGGGAGTGGT CAGGGAGGGT TTGCAATGTC CAGCTGCCCT 120 GTCTCCTGTC CCAGGCAGCG ATGTGTCCAG GGCTCCATAC CAGCTCCAAG CTCTCTGCCT 180 ACAGCTCCCT CACATCCACA CTCACTGGGT CCCAGCTGGA GACCTGGTGG CTTTGAGAGG 240 ATACCGTGGC TTCTTGATGT ACCTGAAGAC TTTGGAACGC CAGAAGTGTT CAGTCCTGTG 300 ATGGGTGTCA GCCAGGCCCA GAAAGCACAC AAACTGGGGG ACACATATGC TAAGTTATCC 360 AGAAAGCCTC AGGGCTGGGG CTGGAAGAGG AGGGCCTTGC CATCCCAAGG TGCTGGTGTG 420 TCCACACGCC CCTGGGGTGA CCGTGTGCAT CTGTGTGTGT GTGTTTGTGG GTGGGTGGCT 480 GACTACTCTG AGTTTGTGGG TGATTCATGT GTACCCTCGC GACAGGCTGT GTTCAGATAG 540 TCTGCTTATG TGCTTGAATT CAAGGACACA AACATCCCTA GGTGCAAGCT TGCACGCACA 600 GTCCTCCCTA CACCTCCACA CGCAACTCCT AATCATCCCT CAGGATCCTC TCCCCGCCCT 660 GCTTCAGCCT TAAGGCCTGC TCTGACCCTC CAGCCCATCC CACTGACCTG CTGACCTTCA 720 TCCCAGACAC TGCTGGGTTC AGCCCTGGAG CCTGGTCACT CTTGCTCCCT GAGGGTGAGG 780 TTGACTCCTT TTTAAATTAC CCCTAAAGCC CCACTTAGGG AGACACAGCC TTATCAATCA 840 ACACTCCTTG AATGAATTAA AACAAACTCC AAGGAAAGGA ACTGCATTTG GGTGGATGGA 900 AACAAGAGCT CTCAAGCTGT TTTCTTTCCT CTTTACCCTT TGCTCTCTGT CTCTTCCCAT 960 CTGTACTTTC TCTAACTTGT TTGCTAACTC AATCGTCAGC TTAGAAAGTA CTTCCTTGTA 1020 TACCCTCCTC TCATTCAAAT CTCATGACAA TCCTCCAAGA CACGAATAAT TATCCTCATT 1080 GCACAGATGA GGAAACTGAG GTTCAGGGAG GCTACGTGAG TTGCCCAAGG TCACACAGCC 1140 TGGAAGGAGT GGGTAGGGAC TAGAACCCTC ATGCGTGAAT GGACACCACC TCCCACCACT 1200 CCCCACCAGT AAGTAGAGGG TGGAGGGTAA AGGGCGATCC AGGGGCTCGG AGAGGATTGG 1260 CCTCTTCAAG CCCTCTCCAT GGCCCAAGGT CACCGTGGGA GGGAGATGCA CCTGGCCCCC 1320 AGGGCCAGGG GTTACCCCAC TCGGCCAGCA ATGGGAGAGG CCATGAGATC TGTGGACATT 1380 GTTCCTGGGC CTGTGGTTAC TGATTTGACA ACAGCCCTGT TCCTCCCCAG CCAGCCAGGG 1440 AGTTAATGAT TAAGGAGGAG ATTAAATATT AACCACCTGT GGGGCCACGG CGTAATGTCT 1500 CCATCTGCAC CTGAGCCTAC CTAAAAATCC CTCCCACCTG CCGTGGGCCA GCCCCACACA 1560 GGGCCTCTAA GCCCCTTGCT TAGGGATACC ACTTCCCCAT GCCCCCATCC TGCCCTGGCC 1620 CTGGCCCTGG CCCGTGTCCA CCCCATCTCA CTCTCTCATA CCCACAGCAC AGACCCAAGG 1680 ACTCTTCCTG TAGCTTGGAA GCTGCAAGCT ACACCACTGT AGGCACTCCT GGTGGGCCTT 1740 CTGGAGGAGA GGACCTGCCT GAACCCAGCT ACTCCTGGGG CTTGGAGAGT CCGCAGGTTA 1800 CATTCCTACC TGTGACCTCG TTTATCAGTG CTCTTATCGC TCTTATCTCC CAAGTCGTTC 1860 CTCCTAAAGA CCCCTCTGAA TCTACACATC CCAGGCCCCA ACACCCTGGG CTACAGCAAC 1920 TCCCCAACAC GCCATTCTCT TCTTTCTTCT AGCAGTTAGA ATCTGGGTGT GTTCTGCCTC 1980 CAGGAAGCCT CTCATATTAA CCTGGGCTAA GGTCTCTGCG GGCCTCTGCT CCCCAGCTTC 2040 CCTTAGGCCG GGGTGATTCA GGCTGGCATT GGCTGCTGCA CGGCTGCAGG AAACCAGCTG 2100 CATCTGTTGG AAGGTCCTTT GAAGTTTAAG TGCACAGCCT CCGAGCGCTG GGGGCGGGGA 2160 CTGCTCTATC TCACCTAAGC CTAGGGCCTG CCCCTGGGTG AAGCCATGGT CACCCTCCCC 2220 ACAGCAGGAA CCACAGGCAG TATGACACAG GGTTCACCTG CGTCTTTTTC TATAAATATA 2280 GAAAAATGGA ATTATTTATT CAAATAATAA CTCTATTGAT ATGCTCTCAT TCCTGTTTGT 2340 GGGGAAGCCC CAGATGACTG TGTGGGTAAG TTACTATGGT ACGTAAGCCC CACCGTAGCC 2400 TGGGCCTGCA CTGCTCTCTC TGCATGTCAG TGAACTGCAT TGACACTGCA GGCCTAGTGA 2460 CAGGCAATGT CATCCCCATT TTACAGATGG CGAAACTGAG GCTGGGTGAA ATTAAAGGAC 2520 TTGGCCACGC TCAAACAGAC AGGAAATGGC AGAAGCTGGC CTGCCTGGTG CAAAAGCCAT 2580 ACAAAACTGA AAAGGACCTA ACACCGTTCT TGCCACAGCT GTCTAGGCCC CAAGCTCAGC 2640 TTCTTTTCAG CCACAGTTCC CAACCATGTG TGGCTTGCTT GCTTTTCTTT CTTTCTTTCT 2700 TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCC 2760 TTCCTTCCTT 2770
|