| Tag | Content |
|---|
EnhancerAtlas ID | HS059-23538 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr19:44249040-44249850 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:44249350-44249371 | GAAGTGAAAGTGAGAGTCACA | - | 6.42 | | PRDM1 | MA0508.2 | chr19:44249353-44249363 | GTGAAAGTGA | - | 6.02 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_09619 | chr19:44247706-44250198 | CD14 | | SE_13735 | chr19:44248778-44249725 | CD34_Primary_RO01536 | | SE_23510 | chr19:44248546-44249649 | Colon_Crypt_1 | | SE_23897 | chr19:44248778-44249630 | Colon_Crypt_2 | | SE_31804 | chr19:44248624-44249835 | Gastric | | SE_32542 | chr19:44248651-44249809 | GM12878 | | SE_50403 | chr19:44248668-44249829 | Sigmoid_Colon | | SE_53073 | chr19:44248614-44249833 | Small_Intestine | | SE_53761 | chr19:44248596-44249830 | Spleen | | SE_59025 | chr19:44248893-44290143 | Ly3 | | SE_62525 | chr19:44242576-44303622 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I043744 | chr19 | 44248452 | 44250080 |
|
Enhancer Sequence | GGGAAAATAC ATAAATGACT CTGACAAGTC TGTCAGCTGC TGGAGCTGGA ATGAGGGGGG 60
GACTCCAGAG ACCCTTGTGG CTCCCCCACC TGCCTTATCA TATATGAAGA GAAACTCCTA 120
TAGTCCCAAC CCCTTCAACT AGGCATAGGG CCTCTGTTCC GTGTCATGGT AGGATTATGT 180
GAAATGTTTT AGACACAAAC AACAGTGTCT GTGAGAACTC TGAAGTAGAA AAGAGCCTAG 240
CATGGTCAAG AAGCTAAAAG GAAGTCAGTG TGGCTGAACA CAGCGGGAAA AAGGGAAGTC 300
TGATCTTGGA GAAGTGAAAG TGAGAGTCAC AGGAACAGAA GGGCAGGTTG GAGAAGATAG 360
GACTCGGCGA CTGAGGGCTA CTGGCACAGA TTCCTGGCAA ACCTGGGAAA GCACATGAAA 420
GGGAGTGGTG TGCAAACAGG AGCCACCCAG GCTTTCGTCT GTGTGTGTGT TTTTTTGTTT 480
TTTTTTACAT TCATATGCTG TTGTCTGTGG GATTTAAGAG CCCCTCTGGA AATTAACTGA 540
GACCAACTCT GGGCCACCAG CTCTGCTGAC TTTCACCACC AGGGGGTGTA AGAGACACTC 600
CTCAAGGAAA ACAGCTACGT TCTGAACTGT GGCTGCTGCT CCTTAGAATT ACCTTAAAAT 660
TTTGTTTTGT TTTGTTTTTT AAAAGCGAAT CCTATAGGCC AGGTGTTGTG GCCCACGCCT 720
GTAATCCCAG CACTTTAGGA GGCCAAGGTG GGAGGATCGC TTGAGGCCAG GAGTTCAAGA 780
CCAGCCTGGC CAACATGGTG AAACTCCGTC 810
|
