Tag | Content |
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EnhancerAtlas ID | HS059-19741 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr17:43249670-43250750 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Atoh1 | MA0461.2 | chr17:43249688-43249698 | AACATATGTT | + | 6.02 | Atoh1 | MA0461.2 | chr17:43249688-43249698 | AACATATGTT | - | 6.02 | RREB1 | MA0073.1 | chr17:43250026-43250046 | CCCCCAACCAACCCAATTCA | + | 6.61 | ZNF263 | MA0528.1 | chr17:43250080-43250101 | TGGGGAGGGGAGGAGAGGGGA | + | 6.27 | ZNF263 | MA0528.1 | chr17:43250085-43250106 | AGGGGAGGAGAGGGGAGGGGA | + | 7.13 | ZNF263 | MA0528.1 | chr17:43250088-43250109 | GGAGGAGAGGGGAGGGGAGAG | + | 7.79 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_04340 | chr17:43247900-43250852 | Brain_Anterior_Caudate | SE_05493 | chr17:43247643-43251138 | Brain_Cingulate_Gyrus | SE_08396 | chr17:43247530-43251110 | Brain_Inferior_Temporal_Lobe | SE_11664 | chr17:43249023-43251261 | CD20 | SE_14897 | chr17:43249828-43250904 | CD4_Memory_Primary_7pool | SE_17616 | chr17:43248328-43250887 | CD4p_CD25-_CD45RAp_Naive | SE_26109 | chr17:43247379-43251134 | Duodenum_Smooth_Muscle | SE_30505 | chr17:43246948-43250903 | Fetal_Muscle | SE_34119 | chr17:43247378-43250989 | HCC1954 | SE_34723 | chr17:43246812-43254725 | HeLa | SE_35335 | chr17:43247011-43251161 | HepG2 | SE_37184 | chr17:43246945-43251043 | HSMMtube | SE_41920 | chr17:43247951-43250628 | LNCaP | SE_46560 | chr17:43247407-43250979 | Osteoblasts | SE_52300 | chr17:43247539-43250784 | Skeletal_Muscle_Myoblast | SE_53522 | chr17:43247744-43250887 | Spleen | SE_54753 | chr17:43246796-43250862 | Stomach_Smooth_Muscle | SE_57115 | chr17:43247779-43250829 | VACO_400 | SE_58198 | chr17:43247689-43250776 | VACO_9m | SE_66823 | chr17:43248412-43250792 | Jurkat | SE_68795 | chr17:43247672-43251035 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I045168 | chr17 | 43246209 | 43251994 |
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Enhancer Sequence | GGGAAGGGAA GCGCAGAGAA CATATGTTTC ATGGGAGTGA CTGTTGAAGC CTCCCACCAC 60 CCCTGCCCAG CCTGTCTTAG GATCCCTCTT TCTTCCCCGG CAGGAACTGC CCGACCCCAG 120 GTGGAAACTC CTGTGCCCAG TGGACAGACC CTGCCTGCAA TAGGGTCAGA GTATGAGGGA 180 GAGGGGTAGG CAGAGATTGG TGGGCTGGGG CAGGAAGAAG CTGCCAGGGA GTGGGGGGAG 240 GGGGTCCAAA GGGAAGTAAC GGTATTGGGG GGAAAGGTGG CCAGGTCCCA TTGCCCTTGT 300 TGGGAACAGG CAAGTGTGGC ACTGGCCCTT TAAGTGGGGG TGCCAGTCAG TGCCCTCCCC 360 CAACCAACCC AATTCATGGG CACACTGAGC ATGTGCAGGG GCTGTGCATG TGGGGAGGGG 420 AGGAGAGGGG AGGGGAGAGG GGGGCATACA TTCCGGAGGG AGCTTCTCAT CCCCCTACTT 480 CCGGTAGCTG CCCCCACTCT CCTTCCTGGG TCTGACAAAG GAGCCCATGG TGCTCACCCA 540 ATCCCTTCCC CCACCCCAGG CCCCAGGGGG TGCTGCCCTC TGCAAGTGCT GAAGCTGCCA 600 TGGGTGCTGG GCAGGCCCTC TCTGCCCTGG GGAGTCTCCT GGCCGCCTGG AGGTGGCACA 660 CATGCAGCCC AGTGCCGGCC TCACTTCCCT GGTGTGGGCG GCGGCGAATC TTCCTGCTGC 720 CTACGTGTTC CATTTCATTC CATTGGTGCC AGGGTTTTTA AAAGAACCAT CCACCTGTGA 780 TGCCACTTTG AAAGTGAAAC AGCTCAAAGG ATGCAGGCCC TACCCCCTAA CCAGGACCTT 840 CCAGTCAGAG AGGAAGCAAA CAGCCCAGAG GCTGCAAGGG CCTTCCTTGA ATCCCGCTCC 900 TTCTGCTTCT CCCCTGCTGG CCAAGGGATC AAAGTCAGCT TCCTCCAGAC TACCTTCACC 960 TGCAGCCTGG GACCTTCCCT CAAACCTTTC CACCACCTAA ACCTTACCTG TTTCTGCCAA 1020 GTCTTCCCCT CTCCCAGCCC TCAGCCCCTC CTGTTACCAC CCCTACCTCT TTAGCACTTG 1080
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