EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-19594

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr17:40139200-40139830

Target genes

Number: 19
Name	Ensembl ID

JUP	ENSG00000173801
LEPREL4	ENSG00000141696
FKBP10	ENSG00000141756
KLHL10	ENSG00000161594
NT5C3L	ENSG00000141698
RP11	ENSG00000259623
KLHL11	ENSG00000178502
ACLY	ENSG00000131473
AC091172.1	ENSG00000204815
CNP	ENSG00000173786
NKIRAS2	ENSG00000168256
DNAJC7	ENSG00000168259
ZNF385C	ENSG00000187595
DHX58	ENSG00000108771
KAT2A	ENSG00000108773
HSPB9	ENSG00000197723
RAB5C	ENSG00000108774
GHDC	ENSG00000167925
STAT3	ENSG00000168610

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_03345	chr17:40138988-40139638	Brain_Angular_Gyrus
SE_04994	chr17:40137078-40146143	Brain_Cingulate_Gyrus
SE_06054	chr17:40138603-40140441	Brain_Hippocampus_Middle
SE_06879	chr17:40136927-40146147	Brain_Hippocampus_Middle_150
SE_07997	chr17:40138407-40145949	Brain_Inferior_Temporal_Lobe
SE_09953	chr17:40138933-40140450	CD14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH17I041986

chr17

40138604

40140608

Enhancer Sequence

AATGTGAGCA TTAGAGGTAG GCACATCCTG GCTCATAATC ACCCTGTCAG ACACAGAGTG 60
CCCTCCACTC AAAACACTCA AGCAGAGAGT AGCCATCCAG GGTGTTTCAA AAGGAAGTTC 120
CTTTATCCTG GGAGGCTGAG CCGGATTACA TCTCTTCCAA CTCTAAGATT GTCTTCCCTC 180
GCCCAGAACA AACAGGATGA AGTACAACTC TCAACTGTCT CCAAGAGTTG TTTTCTCTTC 240
CAAGCACCAT ACATTCATTC AACAAAACAT TTATTCAGTG AGCACCTATG TGTCAAGCAC 300
TGTGCCAGGG TAGAGCATAA GTGTACAACA CAAAATAAAA TCTCCAAAGG AAATGGATTT 360
AAACTTTTTA ACAAAAGGAA TTTGGGTCAG GCATCAGAGG AAACTTACTG ACCGTGAGGG 420
GCGTTAGACA CAGGCATGGG AGACTGAGGG AGCTTGTGCA ATCTCCTCCG CTGGAGGTCT 480
ATAAAGATAG TCTAGGGCTG GAACAATCCC ACCTAGAGGC AGGGGGAAGG ACCAAATGAC 540
CTCACAACAT CTCTGGGTCT GCTTCGTCAT CCACAAGGCA ATTCCCCTGA GGCCAGCGGC 600
AACTCCCTCT TCCCCCTACC CATCAGAGGC 630