EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-11388

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr12:104276490-104277380

Target genes

Number: 6
Name	Ensembl ID

NT5DC3	ENSG00000111696
HSP90B1	ENSG00000166598
RP11	ENSG00000214198
C12orf73	ENSG00000204954
TDG	ENSG00000139372
RPL18AP3	ENSG00000213442

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr12:104276934-104276945	AATGAGTCAGA	-	6.32
ZNF263	MA0528.1	chr12:104277092-104277113	CTCTCATCCTTGCCCTCCTCT	-	6.33

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH12I103883

chr12

104276801

104276950

Enhancer Sequence

TGTGACACAA TGTATTAATA GATATCATTT TAGTATTTCA GGCCTTAAAG GAAGCTCTTC 60
TACTTACCAC ATTTCAGTAG CCTATTCATA AACATCTTAC CTAACATATC TTTTGGAGAT 120
CACCAGATAA ATATGAGCCT TTCACTCTTC AGCAGTCAAA GCCAATTCTC CTGATCCACC 180
CAGGAAGCCC CCTCCTCTGA GAAGGCTCCC TGGGTCTACC AGGCAGAGCA CCAGCCCCTC 240
CCTCTTCTGT GCTTGCAAAA GTTCATTGCA ACATTGCTCT AGCGAGGCAT TATCACCACG 300
TACAGTAATT CTCTGGCTCC ACATCTTCCC CCACTAGATG GAAAGCACCT ACAGGCTTAG 360
AGCTGTATCT ATTCACTTCT GCACCCTCAG GGCCTAGCAG GTTGTGGGAG ACAGGATGGG 420
TCATAAATAG ATGTTTGCTG AATTAATGAG TCAGAGGAAA AGAAGAAAGA GACAAGGAAG 480
GGAAGGGAGG TGGGTGGGAG GGAGTAAGAG GGAAGGGGAA GTAGCATAGG GAAAAGAAGG 540
GAATGGAAGG GAAGCAGATA GGAGGGTCTA GCAGAGCTTG CCCAATCTTC TACCTTTTCC 600
AGCTCTCATC CTTGCCCTCC TCTCTCTGGA ATGCCACTTA ACTTTGAGAG GACTCCACAT 660
AGAGTGAAGA GGAGAAATGA ACACTCTGCA GGGCCAGACA GACCAAGGGG AGTAACCCTG 720
GAGATCCAGC AACTACAGAA GTTGATGCCA GAGGATGGTT CCATCTGAAT GAATGATGAG 780
TGCTTGAATG GATAAATGAA TGACACAACT TGTTCAAGGG AACATGGGTA TCTAAACATA 840
GCACTGGTAA AAGGGAAAGC TAAATCTGCC TAAATACAAT GATATAAAAA 890