EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-08400

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr11:67412620-67412750

Target genes

Number: 30
Name	Ensembl ID

ADRBK1	ENSG00000173020
ANKRD13D	ENSG00000172932
SSH3	ENSG00000172830
POLD4	ENSG00000175482
7SK	ENSG00000201684
AP003419.11	ENSG00000256514
CLCF1	ENSG00000175505
RAD9A	ENSG00000172613
U6	ENSG00000253024
TBC1D10C	ENSG00000175463
CARNS1	ENSG00000172508
PPP1CA	ENSG00000172531
RPS6KB2	ENSG00000175634
AP003419.16	ENSG00000255949
PTPRCAP	ENSG00000213402
CORO1B	ENSG00000172725
TMEM134	ENSG00000172663
AIP	ENSG00000110711
PITPNM1	ENSG00000110697
CDK2AP2	ENSG00000167797
GSTP1	ENSG00000084207
RP11	ENSG00000255119
C11orf72	ENSG00000184224
NDUFV1	ENSG00000167792
NUDT8	ENSG00000167799
TBX10	ENSG00000167800
ACY3	ENSG00000132744
AP003385.2	ENSG00000227834
RPL37P2	ENSG00000239559
UNC93B5	ENSG00000184795

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr11:67412723-67412737	GGCCCCGCCCACTT	+	6
SP1	MA0079.4	chr11:67412721-67412736	CTGGCCCCGCCCACT	+	6.58
SP2	MA0516.2	chr11:67412720-67412737	CCTGGCCCCGCCCACTT	+	6.33
SP4	MA0685.1	chr11:67412721-67412738	CTGGCCCCGCCCACTTC	+	7.4

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_25308	chr11:67411947-67415347	Colon_Crypt_3
SE_59978	chr11:67412169-67420565	Ly4
SE_60879	chr11:67411488-67436387	DHL6

Enhancer Sequence

GACCTGGGGA CCAGGAAGCA AGGGGTTAGG CAGGTGCAGG ACCCATATAC TCCTTGAAGA 60
GGCCCTGCCC CTTGGTGACT GGACCCGCCC CTCCAGCCCT CCTGGCCCCG CCCACTTCTC 120
AGAAGGCTGC 130