Tag | Content |
---|
EnhancerAtlas ID | HS059-04288 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:226061470-226061980 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Lhx3 | MA0135.1 | chr1:226061496-226061509 | AGCTAATTAATTT | - | 6.15 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_04103 | chr1:226060552-226071311 | Brain_Anterior_Caudate | SE_04909 | chr1:226058067-226071472 | Brain_Cingulate_Gyrus | SE_05837 | chr1:226057906-226071834 | Brain_Hippocampus_Middle | SE_06795 | chr1:226060579-226071351 | Brain_Hippocampus_Middle_150 | SE_07978 | chr1:226058042-226071459 | Brain_Inferior_Temporal_Lobe | SE_23251 | chr1:226060678-226062587 | Colon_Crypt_1 | SE_23870 | chr1:226061669-226062501 | Colon_Crypt_2 | SE_25061 | chr1:226060730-226061620 | Colon_Crypt_3 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I225873 | chr1 | 226060731 | 226061620 |
|
Enhancer Sequence | TTGATCCTCA CTCAGCCCTG GCCCCAAGCT AATTAATTTC AAAGATGATC ACTTAAAAAT 60 ACTCAAGGTG AGAAAGAAAA TGGGCATCCT CTTCAGAGGA TGACGAAAGC CCTCAGTATC 120 TAAAGCAACC AGTCTGAAGC CAACAAGGTT CATAGCCTTG GCCCAACAGA AGCCCTGAGG 180 GAGCTGAGCA TCTGAGCCTG GGTTTTTGTT TTTGTTTTTT GTTTTGTGAG CACAATGAGG 240 GTAGCGAGGC TGACCTCATG GGTCTGTGGT GAAGAGCAAA GAGAACAGCT ATTGGTACAG 300 GCCAGGTAGA TACACTTAAT GAACACAATC TCATAGCAGT GTCATGTGTG GGTCCTGCCC 360 ACATGGAGGG CTTCATAAGC CCCTAGCCCA TTCCAGGGAC ACACACACAC ACACTATACA 420 CACATATATG CACACACGCA CATATACACA CTCACGCACA TATACACACT CACACGTACG 480 CACACGCATG CTCACAGCCT AGGCGATATG 510
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