| Tag | Content |
|---|
EnhancerAtlas ID | HS059-04287 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:226039210-226040360 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr1:226039969-226039984 | GAGGTCAGGAGTTCA | + | 6.22 | | Nr2f6(var.2) | MA0728.1 | chr1:226039289-226039304 | TGAACTTTTGACCTC | - | 7.82 | | RARA | MA0729.1 | chr1:226039286-226039304 | TCTTGAACTTTTGACCTC | - | 7.78 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_04909 | chr1:226038991-226052376 | Brain_Cingulate_Gyrus | | SE_05837 | chr1:226029277-226050904 | Brain_Hippocampus_Middle | | SE_06795 | chr1:226029431-226048398 | Brain_Hippocampus_Middle_150 | | SE_07978 | chr1:226039034-226046265 | Brain_Inferior_Temporal_Lobe | | SE_11743 | chr1:226033094-226042126 | CD20 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 226039426 | 226040000 | | chr1 | 226039506 | 226039808 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I225851 | chr1 | 226039021 | 226040763 |
|
Enhancer Sequence | CAGGCGCCTG CCACCATGCC CAGTTAATTT TTGTATTTTT AGTAGGGACA GGGTTTCATC 60
ATATTGGCCA GGTTGTTCTT GAACTTTTGA CCTCAGGTGA TGCACTGCCT AGGCCTCCCA 120
AAGTGCTGGG ATTACAGGCA TAAGCCATCG TGCCCAGCCC CAGGTTCTTT TTTAAAAAAT 180
AAATTTTGTT TTGAAAGTGT AAATACTGTA GATTTTTAAA ACTACACAAG AAAGTATACA 240
GGGAAAACTA AAACAACTTT TCCCCCTAAA ACTCAGCTAT CACTGCCAGC AGTCTCTTGG 300
GTTTTTTGTT TCCTTCTAGA GCCTTTCATT AATCTGCCAG TTGCAGATGT TTTATTTCAG 360
TGGCCAGGAC CTTGGTCTTT AAACAGTCCT GAGTTCAAAG GCTGGTTCTC CTGCTTACTA 420
ACAACATACG AAGTTATTTT GTGTGAAGGG GGAATAGAAA CAGGAACTGC CTTGTAGGAT 480
GAGGTGAGAA ATGTGGTAAT CCACGTGGAG GCAGGCATCT GCCAGAGTGA AAGCAGCACG 540
AGAGCTTTGA TTGTGACTCT GGCACTGTCT TACTTGCTGC TAAAGAAATC AACCATGAAC 600
GACATAGTCA GTGGGCAGAG AACCTCAGAC CAGAAATACT AAGAGAGGTC CTAGCTGAGG 660
GCCAGTGGGA GGAATTCATT TAAAAATGAA TGAGGCCGGG TGCTGTGGCT CATGCCTATA 720
ATCCCAGCAC TTTGGGAGGC TGAGGCGGGT GGATCACCTG AGGTCAGGAG TTCAAGACCA 780
GGCTGGCCAA CATGGTGAAA CCCCATCTCT ACTAAAAATA CAAAAAGTTA GGCAGGCATG 840
GTGGCGGGCA CCTGTAATCC CAGCTACTCA GGAGGCTGAG ATGGGAGGAT GGCTTGAGCC 900
CAGGAGGTGG GGGTTGCAGT AAGCCAAGAT CATGCCACTC CAGCCTGGGC ATCAGCATGA 960
GACCCTGTCT CAAAACAAAA AAAGAAAGAA ATGAGTGAAA TCTGGTGTCA CGTGAGTCTT 1020
TAGCAGCTTG TGGCTCTTGT GGCTGTGGTT TTGGGAACTC CATTGTGCCC TGGTGATAGC 1080
TGTCCCCGAG AGGTTTGGTG CAATCAGCCG TCCATGTACC CATGTACCCT GGGACAGGCT 1140
CCAGGGCCAC 1150
|
