Tag | Content |
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EnhancerAtlas ID | HS059-03986 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:208055890-208058060 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:208056935-208056956 | TCTGAGTTTCAGTTTCTTTTT | + | 7.9 | IRF8 | MA0652.1 | chr1:208056939-208056953 | AGTTTCAGTTTCTT | - | 6.03 | IRF9 | MA0653.1 | chr1:208056939-208056954 | AGTTTCAGTTTCTTT | - | 7.05 | RUNX1 | MA0002.2 | chr1:208056449-208056460 | CTCTGTGGTTT | + | 6.14 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_03907 | chr1:208056217-208057280 | Brain_Anterior_Caudate | SE_03907 | chr1:208057743-208060627 | Brain_Anterior_Caudate | SE_12436 | chr1:208055742-208058024 | CD3 | SE_13353 | chr1:208056372-208058013 | CD34_Primary_RO01536 | SE_17929 | chr1:208055299-208058870 | CD4p_CD25-_CD45ROp_Memory | SE_25552 | chr1:208055764-208062029 | DND41 | SE_30242 | chr1:208057632-208059935 | Fetal_Muscle | SE_31189 | chr1:208055513-208062336 | Fetal_Thymus | SE_37661 | chr1:208057286-208068282 | HSMMtube | SE_39422 | chr1:208055123-208061722 | Jurkat | SE_41337 | chr1:208057654-208067896 | Left_Ventricle | SE_42838 | chr1:208057100-208066737 | Lung | SE_48845 | chr1:208057584-208063141 | Right_Atrium | SE_49854 | chr1:208055043-208065799 | RPMI-8402 | SE_52485 | chr1:208055851-208056951 | Small_Intestine | SE_52485 | chr1:208056965-208057771 | Small_Intestine | SE_53314 | chr1:208055859-208060469 | Spleen | SE_55308 | chr1:208055966-208056385 | Thymus | SE_55308 | chr1:208056409-208057042 | Thymus | SE_55308 | chr1:208057094-208058064 | Thymus | SE_66285 | chr1:208055123-208061722 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 208056200 | 208056291 | chr1 | 208056600 | 208057564 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I207882 | chr1 | 208055729 | 208059920 |
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Enhancer Sequence | TGACAAGAAT TTTAAAACAG ACAGCCATCA TAAACATGCT TTAATGAGCA ATTGCAGCAT 60 GCTTGAAACA AAAGAACAGA AACACTCAGC AAAGAAATAG AAGGTATAAA GAAGAATCAC 120 ATGCTTTGCT TGAGCCTTAA AAGAATCACT CACATTTCTG GAACAATCAC CCTCACTTTG 180 CTCCTGGGAC AAGGCTTCTT CCTCTCTCGG GAACACCCAT ATCTCTCCTT TTCTCCTCTT 240 TAACTCCTGC TTGACCAAAG GATCAGTCCA GACGTCACTT CTCCTGGGAA GCCTTCCATG 300 GTCTTCCACG GCTTCCATGC CCCTCCCACT CAGAGCTTCC TATACCATAG CACTTACACT 360 CAATGCATAT TGTTCTGTCA TCTGTCCCTC CCACATCCAC CCAATGTAAA GACTTGACAG 420 AAGGGACTAT GTCTTATCCC AGGTGCCTGG CATAGTACCT GGCTTATAAT AAGCACTCAA 480 ATATTTTTTG AATAAATGAA TAAATTAATG AATAAATGGA AACTCTTCTG TGGCTCCTCT 540 TCTATTGGAT AAAATTAAAC TCTGTGGTTT AGCTTTAAAC ACCCTACACA AACTGTGACA 600 CCCGGATCTT TCTGGTACTC GGCTTCCCTT AACACATTCT ACTTCTCTGT CATACCAGAA 660 AACACATTGT CCTTTGACAG TACCTTATCT TTCCCCATCA CTACATATTG TATGTACTCT 720 TCTATCAGTC TCAAATGTCC TTACTCATTA CTATCATCAA AATCGTATTC ATTTTTACAG 780 GACCCACTCA GAAACCACCT GTTCATGACC CAGTCTCAGA TCTTCTCAGC TGGAAAGGGT 840 CCTGCCCACA TCTAGATACA AAGCACTTCA TTTAGTCTTT CCTCGTGTTA TTTCTCACTT 900 TCTGTTGTGC ATTTTTTTTC TTGCTTCTTT GTTTAAATGT GTGTTGTATT ATCCCCAAGA 960 TTTAAACATT TGGGGTTCAA ATAAACTCAC ATCCTATTCA TCTTTGCCTC TGCCACTGTG 1020 CACGTAACAC AGTCCCTTGT TATTCTCTGA GTTTCAGTTT CTTTTTCTGA GATAATAGAA 1080 CCTACTTCAC AGGGTTTCTG TGAATGTTAA GTAAAATATG CTATTTAAAT ATTGGCACCA 1140 TATCTCAATT TTCATACAGT AAGCACTCAA AAACTGTTAG CTACTATCAT TGTAAATATG 1200 ATTATTATTT GAAGAAATAA ATAGACTGAG CAAGTCCTGT TACCTCTACT TTGAAACCAC 1260 TTTTTGAATT CTGCTTGATC TCATCACTGC CAATATGATC ACCTGCTCCC AGCCATGATC 1320 GTTCTTCTTG CTACGGTCTC CTTCTACTTT CTTATCCCTC AACCTCTATT CTCTACTCAG 1380 CAGCCAGCAT GATCCTTTTA AAACATAAAG CAGATGATAT GACTTCTCTG CTCAAAACCC 1440 TCCAGTGGCT TCCCAATCTA CAACTAAAAA GGCCCCATGT AGTCTGACCT CCTGCCTCTC 1500 CCCACCCCCA CTCACTGACA CAACCTCATG GCCATCTTGC CCCCTGCCAT CTGAGGCTTT 1560 CTGCACTTGG CAGCTTTTCA TCATAGGGCT TTGCACTTGT CCTTTCCCCT GTGTGGGATA 1620 ATCTCTCCCA GCTTGGCATA CAACCTGCTT CTCCACTTCA TTCAAGTGAA GCTGTGCTCT 1680 CCACTGTTAT TTTTCTAAAA GTAACCACCA TATGTAAAAT ACCAACCATT ATTCTCAATA 1740 TATTTTATGT TTTTCATAGC TCTCAATCCT GAAAACACAT GTATATACTT ACTGAGATGA 1800 CATTGTTTAC TGTCCTCTTC TGCTAGAATT ATAAGCTTCA TGAGTGTTTG CTGTATCCCC 1860 AGTCTCAAGA ACAGTGTCTG GCACATAACA GATGTTCTGG CACATTTCGC GCAGTGTCTG 1920 GCACATCATA AGACTTGATG AATGATTGAA TGGTGGCTGG AAGCCTCTTC GATGGGGGCT 1980 TTAGGAAGAG AAGCAGCATC CTGTTGCACA AAATCGATGA CCTATTACTG GTTTTGTGTG 2040 AAGAGGAAGT GTGGGATTAA TCTACCTAGA AGGGATGAGA TGGAAGTGAT CTATTTATCT 2100 GGACTTAGAT GGTATTCCCA TTTATCCATT CAGATGAAAA TCTGGCTGAA GATAATTCCA 2160 GATATGCTCT 2170
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