EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
HS059-03841 
Organism
Homo sapiens 
Tissue/cell
GM12878 
Coordinate
chr1:204489290-204492020 
TF binding sites/motifs
Number: 5             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
BCL6BMA0731.1chr1:204489541-204489558TACTTTTTAGGAATCCA+6.3
Nr2f6(var.2)MA0728.1chr1:204491742-204491757TGATCTCTTGACCTC-7.23
SOX10MA0442.2chr1:204490514-204490525TGCTTTGTTTT-6.02
SPI1MA0080.4chr1:204491473-204491487CAAATGAGGAAGTA+6.39
SPICMA0687.1chr1:204491473-204491487CAAATGAGGAAGTA+7.12
Number of super-enhancer constituents: 41             
IDCoordinateTissue/cell
SE_10255chr1:204488513-204492182CD19_Primary
SE_10905chr1:204478915-204495191CD20
SE_12119chr1:204489948-204491524CD3
SE_13597chr1:204489821-204491333CD34_Primary_RO01536
SE_14682chr1:204489435-204491533CD4_Memory_Primary_7pool
SE_15784chr1:204490042-204491400CD4_Memory_Primary_8pool
SE_16029chr1:204489669-204491352CD4_Naive_Primary_7pool
SE_16029chr1:204491483-204492072CD4_Naive_Primary_7pool
SE_16600chr1:204489581-204491324CD4_Naive_Primary_8pool
SE_17082chr1:204489773-204490975CD4p_CD225int_CD127p_Tmem
SE_17627chr1:204489408-204492187CD4p_CD25-_CD45RAp_Naive
SE_18109chr1:204489383-204491514CD4p_CD25-_CD45ROp_Memory
SE_18616chr1:204489059-204491394CD4p_CD25-_Il17-_PMAstim_Th
SE_19822chr1:204489850-204491152CD4p_CD25-_Il17p_PMAstim_Th17
SE_20382chr1:204489411-204491656CD56
SE_20974chr1:204489541-204491204CD8_Memory_7pool
SE_21753chr1:204489722-204491323CD8_Naive_7pool
SE_22234chr1:204489751-204491501CD8_Naive_8pool
SE_22815chr1:204489559-204491396CD8_primiary
SE_25573chr1:204484598-204492340DND41
SE_26513chr1:204489600-204491248Duodenum_Smooth_Muscle
SE_30920chr1:204481371-204492181Fetal_Thymus
SE_37407chr1:204489531-204491790HSMMtube
SE_43783chr1:204488115-204491714MM1S
SE_49909chr1:204489299-204491309RPMI-8402
SE_50149chr1:204490273-204491501Sigmoid_Colon
SE_51536chr1:204489754-204491160Skeletal_Muscle
SE_52421chr1:204490302-204491415Small_Intestine
SE_55186chr1:204489547-204490989Thymus
SE_55186chr1:204490991-204491568Thymus
SE_55186chr1:204491571-204492189Thymus
SE_58430chr1:204415099-204506026Ly1
SE_59413chr1:204449600-204501284Ly3
SE_59794chr1:204415680-204491493Ly4
SE_60937chr1:204449314-204494869DHL6
SE_61475chr1:204430067-204500813Toledo
SE_62377chr1:204415291-204492168Tonsil
SE_66772chr1:204489410-204489874Jurkat
SE_66772chr1:204489901-204490482Jurkat
SE_66772chr1:204490530-204491283Jurkat
SE_67322chr1:204488115-204491714MM1S
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr1204491400204491596
chr1204490044204490920
Enhancer Sequence
GCTACGCGGG AGGCTGAGGC AGAAGAATGG CATGAACCCC GGGGGGTGGA GCCTGCAGTG 60
AGGGGAGATC TCGCCACTGC ACTCCAGCCT GTGCGACAGA GCGAGACTCC ATCTCAAAAA 120
AAAAAAAAAA AAAATGAATT TTGATATGAC AGTAGGAATT AATCTATGTT AGTGGAACAA 180
AATTTCCCAA ATTACATGCA ACATCCCTGC TTTTTTTTTT TTTTAATAAT TAAGAGCAAC 240
TAAACTAAAA ATACTTTTTA GGAATCCATT TTGATGCAGT AAAATGTATA AAAAGGAAAG 300
CAAGGGAAAT GAAAACAATA GGGTTCAGGA TGATTATTAT TGCAGGAAGG CAGCAAAATG 360
GGATGGGGGA TATTATCGTT AAATATAGGT TATGATCAGA GTCTTAGTTT GTGGAAGATT 420
ATTGCGTTAA AAATAATCCA GGCCAGGTGT GGTGGCTCAT GCCTGTAATC CCAACACTTT 480
CGTTGAGAGA ATCACTTGAG GCCAAGAGTT TGAGACTAGC CTGGGCAACA TAGCAAAATC 540
CTGTCTCTAC AAAAAATAAA AAAATTAGCC AGGAATGGTG GCGCATGCCT GTAGTCCCAG 600
ATAATCAGGA GACTGAGGTG GGAGGATTAC TTGAGCCCAG GAGGTCGAGG TGGCAGTGAG 660
CTATGTTTGT GCCACTGTAC TCCAGCCTGG GTGACAGAAC AATACCCTGT CTCAAAAAAA 720
TTATGAAAAT AAAAAGGTAA AAATAAGTAA AATGGGCCAT GTGTGGATGA ATAATCAGCA 780
TATGTCTTGA ATAAAAGAGT TATGATTAAT TCTGTGTACT TGAGGTCTAA TGGGAAAAAA 840
TGCTGCTAAA CGGGGATGTT AGTGCTTGTC TGAGTTTGAA ATCTTGACTC CAACAACTTA 900
CTCATTGGGT GATCTTGGAC AAATAACTTC TGTTTCTCTT TCCTGATCTG TAAAATAAGG 960
ATAATAGCTA CATAATAGGG CTGTTTTGGT ATTAAATGGG TTTATATGTA TGCCTGGTAC 1020
ATAATAGGCT TGATGAGTCC TTACCATTTG TTTCAATTAT CTAATGCTAT GGAATAAACC 1080
ACCCCAAAAC TTAGTGAGTT GAAACAGTCA TTTTATTTAT TTTTCATTCA GTGGGATGAT 1140
AGGCTGAGTT GGATAGTTCT TGTGGTTTTG TGGTTTGTCA TGCAGCTGTT AAGTCAGGTG 1200
CAGCTGAGGC TGGAACGTGT GTGATGCTTT GTTTTGTTTT CTTTCTTTTT TTTAAGGACA 1260
CCTCGAGACC GTTGAGTAAG TGCTTTGTTG TAGTCAGGTG GCAACTGGGG CTGGAAGATG 1320
TGTGGTGCTT TGGAGGGTAT GGCTAAGAGT CTGGGCTCAG CTGGGCAACT GCACCTCCCT 1380
CTCCTTGTAG CCTTTTTGTG TAGTCTCCAG TAGAGTAGCC AGATTTCAAG CACCTCCAAA 1440
AGTACAAAAC ATGAGCCTGC CAGGCCTGGA ATTGTCACAT TATCACCTGC TGCATTCTAT 1500
TTATTAAGTC ATAGGGCCAG TTAGGGAGCG TGGTTCATTG GGAGCCATTT TTGGAAACGG 1560
TCTGCACATT ATAATTAATG TTTCTATCTA CCATGTTGCT CTACCATGTA TGTAGTTGTC 1620
AGATTTAGAC ACTGGAAATG TATAAATAGA CAGTTACAAA TTCCTGTCCA CTTGTAGCTT 1680
ATATTTTACA TAATAAATAA TTAAAATATG TAGTGTTTTG GTTGGTAAAA AGGTTGGTAG 1740
GGAAAAATAA AGCAGGGAAG GAGATAGGGA ATACAAGCGG TTGGGAGTTT TAGTTTTAAA 1800
AATGGGTGTT CATATGAGGC CTTGTTGACA AACTGTCATT TGAGCATAGA CAAAAAGAAG 1860
GATAAGAATT AGAGGGCAGG CTAGGAGTGG TGGCCCATGC CTGTAATCCC AGGGATTACA 1920
GCACTTTGGG AGGCTGAAGC AGGAGGATCA CTTGAGCCCA GGAGTTTGAG ACCAGCCTGG 1980
GCAACATAGC AAGACCCCGT CTCTACAAAA AATAAATTAG CTGGGCATGG TGGCATGCAC 2040
CTGTAGTCCC AACTACTTGG GAGGCTGAGG TGGGAGGACT GCTTGAGCCC AGGAGGTTGA 2100
AAGGCTGCAG TGAGCTGTGA TTGTGCCACT GCACTCCAGC CTGAGTGACA GAGTGAGACT 2160
CCATCACACA CACACAAAAA AAGCAAATGA GGAAGTAGGT GATGAGATCA ATAGCCACCC 2220
ATTAAAAGCC AGGTTTTAAA TTTTTTTTTT TTTTTTGAAA CAATCTTGCT CTGTCACCAG 2280
GCTGTAGTGC AGTGGCACGA TCTCGGCTCA CTGCAACCTC CGCTTCCCAA GTTCAGGCGA 2340
TTCTCCTGTC TCAGCCTCCC GAGTAGTTGG GACTACAGGC GTGTGCCACC ACACCTGGCT 2400
AATTTTTGTA TTTTTAGTAG AGACGGTTTC ACCATTTTGG CCAGGATAGT CTTGATCTCT 2460
TGACCTCATG ATCTGCCTGC CTCATCTGGG GAGTACAATC CCAAAGTGCT GAGATTATAG 2520
GCGTGAGCCA CCATGCCTGG CCCACTTCTG AATTTTAAAT TGTGCTTGTT TCCTATTTGA 2580
CTTATTTTAT AGCAAAGTAA GGTAATGGGA GAGGGAGGAA TTTATACTTG ATTACAGCTA 2640
TAAGCCTTTT CAGAAGCATG AGGGATCTTG TTATCTTCAG CCAGTGTATT TACTGATTGT 2700
CTTTTTTTTT TTTTTTTGAG ATGGAGTTTC 2730