Tag | Content |
---|
EnhancerAtlas ID | HS059-03211 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:169084860-169086050 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:169085745-169085766 | CAGCAGTTTCAGTTTCATCTT | + | 6.85 | IRF8 | MA0652.1 | chr1:169085749-169085763 | AGTTTCAGTTTCAT | - | 6.74 | IRF9 | MA0653.1 | chr1:169085749-169085764 | AGTTTCAGTTTCATC | - | 6.04 | TBP | MA0108.2 | chr1:169084885-169084900 | CCAGGGTTTTTATAG | - | 6.19 |
|
| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_03294 | chr1:169084995-169085810 | Brain_Angular_Gyrus | SE_04209 | chr1:169084758-169087150 | Brain_Anterior_Caudate | SE_04970 | chr1:169084702-169088166 | Brain_Cingulate_Gyrus | SE_06194 | chr1:169084609-169087824 | Brain_Hippocampus_Middle | SE_06812 | chr1:169084660-169086170 | Brain_Hippocampus_Middle_150 | SE_07884 | chr1:169084478-169091879 | Brain_Inferior_Temporal_Lobe | SE_23097 | chr1:169085057-169085886 | Colon_Crypt_1 | SE_23869 | chr1:169085081-169085860 | Colon_Crypt_2 | SE_24779 | chr1:169084990-169085588 | Colon_Crypt_3 | SE_26009 | chr1:169084741-169090243 | Duodenum_Smooth_Muscle | SE_28230 | chr1:169084736-169086677 | Fetal_Intestine | SE_29071 | chr1:169084724-169086188 | Fetal_Intestine_Large | SE_31614 | chr1:169084948-169086052 | Gastric | SE_35493 | chr1:169084753-169087352 | HepG2 | SE_36829 | chr1:169084714-169086174 | HMEC | SE_40971 | chr1:169084600-169087206 | Left_Ventricle | SE_41989 | chr1:169085080-169085826 | LNCaP | SE_42710 | chr1:169084804-169086187 | Lung | SE_45292 | chr1:169085211-169085955 | NHLF | SE_48040 | chr1:169085053-169085619 | Pancreas | SE_48434 | chr1:169084577-169087172 | Psoas_Muscle | SE_50499 | chr1:169084819-169085972 | Sigmoid_Colon | SE_51534 | chr1:169073864-169091965 | Skeletal_Muscle | SE_52584 | chr1:169084850-169085991 | Small_Intestine | SE_58956 | chr1:169059341-169133232 | Ly3 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I169115 | chr1 | 169084565 | 169087205 |
|
Enhancer Sequence | ACAGGCGTGA GCCACCGCAC CTGGTCCAGG GTTTTTATAG CCCTATCTTT CTACTAGAAG 60 CAGCAGTTTC TTCTTTTTGG ACACTAAATT TCCAGATATG ACAGGGATGC TTTGCACACT 120 TAGATTTTCA TGGAGTCAAT AAAACCTTAG CTTTCCATGG AAATGTTTAA GAGACATTTG 180 GGAAACATGT TTTTAAAAAT TTTAAAGTGA ATTTAAATGG CATTGTATTT GTTGTGCAGT 240 CTCTCCCTTT AACAAACCCA TGCTTGTTGG GTTAGCGCCT GCCAAGCTTT TCTCCAGAGG 300 AGACCCCCTT AGGCAGTCCT GCAGTGCTGC TCTGCAGCAT CGCTTCTCAT CTGTTGATGC 360 AGTTGGATCT GGGGAGAGAC GCAGCAATTA GCTATGCTGG AGAGGGCTGA GCAGGCACAG 420 GCACGCACAC CCACGTGCAT GCCCACGGAC ATGCAAGCGT GCACACACAC GCATGCTCAT 480 GGATATACAC ACACACTCAG GCTACCAAGC CCTGGCCCTG ATTTGACCCT GCTTGCCTTG 540 CTGCCTGCCC AGTGGTGTAA TGGAAAAGTC TCTTCTTCAC ATCCGCCATT GCCCTTCCCC 600 CACCTCAGGC TCACTTAGCA ACAGTGGAGT GAAATGAAGG TCACTGTGTG TCAATCGGTG 660 GGTCCGGGAG ATTCCCAGCT GGCTTGCTTC CTGGTAGGCA GGTATGAATG TATGCTGCTG 720 TTCTCTCTTT TAAGGTTGTG GGTGGCTGTT TGTTTAGCTC TGAAGTATAG ACGGCTCAGT 780 GCTAGCAGAC ACATTTTCAA AGGGTCATAT TCTTGGCTTG TTGGTAATCA GAATCGGGCA 840 GGAGAAGTGG GGTGGATGCA GACCAGCTGA CCACACTGGC ACCACCAGCA GTTTCAGTTT 900 CATCTTGATT GTAAAGAGGA AATATCTAAT CTTAAAACTC ATTAGGGGCC TGGCGCAGTG 960 GCTCATACCT GTATTCCCAG CACTTTGGGA GGCCGAGGCA GGCAGATCAC CCGAGGTCAG 1020 GATTTTGAGA CCAGCCTGGC CAACATGGTG AAACCCCATC TCTACTAAAA ATACAAAACT 1080 TAGCTAGGCG TGATGGCAGG CACCTCTAAT CCCAGTTACT TGGGAGGCTG AGGCAGGAGA 1140 ATCACTTGAA CCCGGAAGGC AGACGTTGCA GTGAGCCAAG ATCGTGCCAC 1190
|