EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-02620

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr1:147242200-147243850

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6	MA0463.2	chr1:147243013-147243029	AAGCTTTCCAGGAAAA	+	6.22
REL	MA0101.1	chr1:147242256-147242266	GGAAATCCCC	-	6.02
STAT1	MA0137.3	chr1:147243017-147243028	TTTCCAGGAAA	+	6.62
Stat4	MA0518.1	chr1:147243017-147243031	TTTCCAGGAAAATG	+	6
ZEB1	MA0103.3	chr1:147243344-147243355	GGGCAGGTGGG	-	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_49433	chr1:147240822-147242381	Right_Atrium
SE_49433	chr1:147242919-147246084	Right_Atrium

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I147771

chr1

147243375

147244104

Enhancer Sequence

CTCTGTCCTC TCCTGAGGTT CTGAATCATG GAGTTGCCAG GTTGGAGTAA GATTCGGGAA 60
ATCCCCTGTG AAAATGCAAT GTTATCATTT CATGAAGAGA GGCTCTTTTC TGGTTCCAGC 120
TGTTTCTTTG TGATCCTAGA CAAGATATTT CCCCTCCCTG AGCCTCACTT TGCTCACATG 180
TGAAACAAAA GTGTAGAGGC TCTTCCATCT CTAAGTTAGA ACATCTGGGG AGTCTGTGAC 240
TTGCCCAGTT GTGATAGCAT GGCAAGTTAG TGGCAAAGCC AAGAAACAAG TCCAGAGTTT 300
CTGACTTCTA GCTTAGAGGA CAGCAGAAGG AGTCCTAGAA AAAAAAAAAT CTGTGGTCAT 360
AAAAAACCAG CAATACCTCC TTGGAATTAT ATGTCGTAGG AAGCCTTTCT ATTTGATAGC 420
CATTTAAAAT ATTTAATCCT CATAAAACCT TATGAGGAAG ATATTTATTA GCATCTTTGG 480
CAGATGAAGA AACTGAGTGT AAGAGACATT AAATAATTTC CCCAAGATCA CACAGCTAAA 540
ATCCTAGCCA AATGTGACTC CAAATGCCCA GGTTCTTCCT TCGGCCCTAC CCCTCAATTA 600
GATAAACTCT AAGGTCCCTC TGTGATTTTT TCAATACCTC TCATTCTGCG ACCTCCTGAC 660
TCTCAGTGGA CTGTTGAATA CTAAATTTTA CTTGCCCATT ATTTACTAAT ATATCAGAAA 720
CAATTTATTC TCAAAGTGCA TCAAGCTGGC ATCACCAGGA GCCAGCAGCT TCCAACAATA 780
GTAAGGAAGT CAGCTTCCTT TCCAGGAACC CTGAAGCTTT CCAGGAAAAT GGTCATCTCT 840
CCCCTTTGTC CAGCTCAACC CTTGAGCCCA GGTTGGTGCT TATGGGAGTT CATTCACACA 900
GAGAGCTACT GGAATCCCCA GTAAGTGAGT CCTTCCCTAG GACGGGGGCA GAGCTTTGGC 960
CTTGGGTCTC CCTGTCCCTG AAAACGGCAG GTCATCCAGT TCCTGTCCTG ATTGATCCAC 1020
ATAGACAGGT CCCCTGTCCT AAGAGGTGGG GTCAGCCAGT ACCTGAGAGA CCAGGAGGCA 1080
CTGTGGCAGT GCCCTCCACT GCCTGTGCCC CACGAACAGC CAGTGTAGAC GATGAAGAGC 1140
AGGTGGGCAG GTGGGAGTCA ATACCAAAAA ATGGAATTGT AGAGACACTC AAGTGGAAGA 1200
ATCAGGGAGA CTCAGGGAGA GATGGAGGCT AGGAAAATCC AGCCGGGGGA TGGACATTAG 1260
AAGAGCCCTC GGTATGAGTG AGCAGGGCAG GGTGCTCTCC CAACTCAATC AGCCCTGACT 1320
CACTGTGTCG TCTCCTACGA GTCATGACCT TCTCTAGTCC TTGTTCTCCT TATTTGCCAA 1380
AGAAGGAGGC TGGTAATGGA AGAGACCTCT TTCAGTTCTA ATGTTCTCAG ACCTTAGGCA 1440
GTACTAGGAG AGGGGACAGG AGTGAGGCAG TTAAGATGTA AGAACAGTGA CCAGCTTCAG 1500
GAGCCCAGCA AGCACACCTC TGGGGTTCCA AGGCAGAGAC AAAGCAGGGC AGCCTGATTC 1560
TGTGACTGCT GTGGCTCTGT GAACGTCACA TGTGTGGGTG AAGGATGCTC AGAGAGTGTT 1620
GGGTTGGAAG CCACAGAATC CCCTCCTGGT 1650