Tag | Content |
---|
EnhancerAtlas ID | HS059-02170 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:94157620-94160030 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Gfi1b | MA0483.1 | chr1:94159308-94159319 | TGCTGTGATTT | - | 6.62 | IRF1 | MA0050.2 | chr1:94159117-94159138 | TTCTGGTTTCTGTTTCTTATT | + | 6.35 | IRF1 | MA0050.2 | chr1:94158160-94158181 | GACGAGAAAATGAAAGCACAA | - | 6.54 |
|
| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_02579 | chr1:94157835-94160151 | Astrocytes | SE_34666 | chr1:94156170-94161986 | HeLa | SE_35914 | chr1:94156301-94161880 | HMEC | SE_37201 | chr1:94157138-94160168 | HSMMtube | SE_38161 | chr1:94157782-94160479 | HUVEC | SE_51729 | chr1:94156945-94160739 | Skeletal_Muscle_Myoblast | SE_57679 | chr1:94157517-94158002 | VACO_503 | SE_57679 | chr1:94158132-94159107 | VACO_503 | SE_57679 | chr1:94159110-94160716 | VACO_503 | SE_59776 | chr1:94145101-94182733 | Ly4 | SE_63513 | chr1:94156834-94160739 | HSMM | SE_64440 | chr1:94157271-94160872 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 94158601 | 94159338 | chr1 | 94158127 | 94158185 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I093691 | chr1 | 94156587 | 94162086 |
|
Enhancer Sequence | ATAAAGACAA TCTAGGGTTG GCCAGTTTGA TTTTTAAATA AGTGATTTAT AACTGACACT 60 GCATCATTAG GAATGAAGTG CTCGCCGCAC AGCTCGGCAT CCAGTGCAAG AGCAGCTGGC 120 ACAGCAAGCT GGAGGGCTGC AAGAGGCTGT CAGTTTGGCC CTTTCCTCTC TGGTTCCTTC 180 CTCACAGGAA CCCCCCTCCC CAGTGCACAC ACAGCTGCTG TGGGGCACTG CTTTTGCCTC 240 CTCTTGTGTG GTAACCATTT GGAACTGCTT TTAATGGTGC TGTCGACAGT ACTGAGGTTT 300 CCAAATGGTA AGAATAATTT CCAGATAGTA ACACAGTCAA GCATAAGGAG ACACACAAGA 360 ATTGGCCTAG GTGTCTGCAA AGAGGGAGAG AGCACCAAAG GTTCTGATGG GGGAAACACA 420 AACTAAATAT GAATCATAAA AGCTATGCTT ACCAGCCCAG GGCTAAGAAC TTTGTGTGCA 480 TCATCTGAGT TAATCCTTTC AGCAACCTAG AGAGGTGGGG GTTATTAAGC CCTTTTTATA 540 GACGAGAAAA TGAAAGCACA AAAAGGCAGA GTAACCAGCC AAGTTCACAG AGCTGGGATG 600 TGGAGCTCCC TAAACTGGCC TCCCTGACTC CACTGCCCAC TTCATCTCCC AGTGTGAACC 660 CTTGTTCCTC AGAGTGAGTG GGAGAGTTTG GGGTTGATTG CTTGAGCGTG GTGTGGAATG 720 GCACAGTGAA TCTTAAGAGA AGCAAGCAAG CTGGGTTAGG TAAACTTAGC CCAGTGCCTG 780 GCACTTGCTA GGCATTCCAT AGATATTTGA GATTTGGACT TTTGAACAGA GTTTCAGACA 840 TAGGGTCAGA GTGTGTGGGG GTCTCAAGCA GGTCAGGAAC CACAGTCAAG CCTCTACATA 900 CACTTGAATT TTCCCCATGG CAGGAACCCA CATTGAAGGT TCACAGGTGT GTCCTAGCGC 960 CGTCCTGGGG CTGTGGAGCA GCTGCCTCTC CAGTGCCCGG GGTTTGCCAT AAATGCCGAA 1020 TCTCAGCCCC ACCCTAAGGC ACTGACTCAG AACCCACATT TTAACAAGCC TCCCAGTGAC 1080 CTGTGTGAGA GGCACTGCTC CAACTCAACA ACCCTCCTGC AAGGGAGCAA GCCAGCAGTC 1140 ATCCTTCTAC CCAGTACAGG GGAAATTTCT TTTTCCTGTA CTAGGCTTAG GGAATAGCAC 1200 TTTGGGGGGC TAACCCCTGG TGCTGCCCTA ACCTCTTCCT CACAAAACCT TTCATACAGC 1260 TGTGAGAGGC AAACTTCTCA GTTGTCAGCA TTTCCAGGAA GAAAGAACCC CTTGAGTGAT 1320 CTCCATGTGA CCTCGTCTGT CTCAGGTTCA TGAACATGAA GGTGAGAGCA GCTCTTCCTC 1380 ACAGCATGAC CAGGCAGTGA CAAACACGCC ACATGGAAGG AAATGAGTGA ACAATCCTCG 1440 CATATTCTGA AGTGAGTCAT TGGCCTTTCT TGTGGACTGG GTACTGGATG ATTAAATTTC 1500 TGGTTTCTGT TTCTTATTTC AGAATATATT GATGATGAAC ACATAGCGTC CCCCAAAGTG 1560 CAAGGTGCTG GGGACAACAG ATCAGGTGGT CCTTTAAAAC ACTTTATACA AAAATAATAT 1620 TATACTGTTA CCACCTTGGT AACACAGTAA AAATAGAGGA CAGGTAAGAT GCCTCTGTAA 1680 ACACGGACTG CTGTGATTTT GGTGACTAGT AGGGGGCAGA AACTCGAAAG TAGCTCCAGG 1740 GACGCTCACC TCTTGTGCTC CTATCCCACT GTCCATCTCC CATCTGCTCT GGGCTCTCAG 1800 TGTGGAGTGG AGCTGATAGT GGTCTCCACC ACCAAGGCTC TGCCTCTTGC TTGAGCCCCT 1860 GAGCACCTAC TCTTGGCACT CTGTGTGCTT TGCCCACTTA ATCCTCACGA CAGCTCTTTG 1920 AGGCAGGTAT TATTATCCCT ATTTTATAGA TGAGGAGATT GAGGTGCAAA GAGAGGCTAA 1980 GTTGCCCAAG GTTGCATGTC TAAAAAGTAT CAGAGGATGA GAATACAGAT CTGACCAGGA 2040 TTCTAAAGCC CACGTCATTC CCTCCACACC TGGTAGCTTC AGCCTTGCCC AGCTCCTGGT 2100 GGAACTTCCG GTAAGGGATG CTCACAGAGC ACAGGGTGGG GAGCTCCCCT GGCACGTGGA 2160 AATCACATCA CACTGTTGGC TGGCAACTCC ACTTCCATGT CAATCTGGTG CCAGCTCCGG 2220 GATCCTGAAA TGCCCTGCAT GAATCATCAA GGGACAAAAA GAGGAGACTT TCCAGGGACT 2280 GACGCCCTCC CAGCCACCGT GGGATCCCGG CTACTGTGAC TGAGCCCAGT CATGACTCCA 2340 GAGTGCTTCA CATCACATCA TTCTTTCTCA GCATCCAAAA TGTGAGTCCT CTGGGCATGA 2400 ATTCTCTCCT 2410
|