Tag | Content |
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EnhancerAtlas ID | HS059-01701 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:54742430-54744020 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:54743272-54743293 | GTGATGAAAATGAAAGTAAGT | - | 6.53 | NR2C2 | MA0504.1 | chr1:54743389-54743404 | TGACCCCTGCCCTCT | - | 6.43 |
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| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_01019 | chr1:54742220-54743317 | Adrenal_Gland | SE_01019 | chr1:54743357-54745653 | Adrenal_Gland | SE_01595 | chr1:54735208-54747683 | Aorta | SE_03451 | chr1:54742376-54744111 | Brain_Angular_Gyrus | SE_04901 | chr1:54742151-54747662 | Brain_Cingulate_Gyrus | SE_05919 | chr1:54734892-54749698 | Brain_Hippocampus_Middle | SE_07802 | chr1:54742248-54747743 | Brain_Inferior_Temporal_Lobe | SE_08904 | chr1:54742651-54742878 | Brain_Mid_Frontal_Lobe | SE_24580 | chr1:54742299-54743037 | Colon_Crypt_2 | SE_24580 | chr1:54743350-54744906 | Colon_Crypt_2 | SE_25961 | chr1:54737420-54746794 | Duodenum_Smooth_Muscle | SE_26701 | chr1:54737688-54747569 | Esophagus | SE_28122 | chr1:54742303-54745062 | Fetal_Intestine | SE_29698 | chr1:54742317-54744189 | Fetal_Muscle | SE_31383 | chr1:54733777-54747551 | Gastric | SE_41585 | chr1:54742296-54743306 | LNCaP | SE_41585 | chr1:54743339-54746155 | LNCaP | SE_42582 | chr1:54737622-54745972 | Lung | SE_46626 | chr1:54742299-54743302 | Ovary | SE_46626 | chr1:54743369-54746342 | Ovary | SE_47967 | chr1:54742267-54743053 | Pancreas | SE_47967 | chr1:54743288-54743925 | Pancreas | SE_50141 | chr1:54737715-54747690 | Sigmoid_Colon | SE_52383 | chr1:54737623-54747577 | Small_Intestine | SE_54182 | chr1:54736914-54745759 | Spleen | SE_54942 | chr1:54737059-54745949 | Stomach_Smooth_Muscle | SE_65414 | chr1:54736995-54742916 | Pancreatic_islets | SE_65414 | chr1:54743507-54745020 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 54743012 | 54743800 | chr1 | 54742604 | 54742755 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I054271 | chr1 | 54736922 | 54747506 |
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Enhancer Sequence | GTGCTGCCCT GGCTTCCCAC TGCCCACTGG ATCAAGCCCA TACTCAACAA GGTCCTTCAA 60 CAATTGCCCG GCAACCTCTC CAGCCTCATC TCCCGCTGAG CACCTGTCAA CCACCTCATT 120 CTAGACACCA TCTCAGCCAG GGCTGCACTG CCTCCAGGAA TGCCCTCCTG ATTTCTCAGC 180 TTGGCAGACA GGCCTCTCCT GTGTCCTGCC ACAGGGGATG GGTTACCTGT CAGTCTCTCT 240 GCTAGGCTGG CTGCTCCTGT GGGCAGACTA TGGTTGATTC AGTTCGAGCC TGGAACCAAG 300 CCCCATGCCT TGCATATCAG AGACGGTCAA TGACAGTCAT AACCACAGTC CTTTCTCCTT 360 CTGTGACTTC ATCTCCCCAT CTATAAATGA GAAGCTTGGA CTACATCAGG GATGGCAAAG 420 AGGATATGTA CCACCACCGA CACATTCACG TTCATGGTAG ACATTGCCAG TCACTATCTG 480 TTGAGCCTGG ACACACAGCT TCAGAATCAT TCTCACGGTG TTCTCAGCAG CCACCACACA 540 TCAAGCAGAG CTGGCATTTG AATGGGGACT TCTTTGCTAC TTCTTTAGAT AAGAGTTATG 600 GTTTCTCTAT CTCCTTTCGG TCTCTCCCTC CTTTTATCTA ATTCTCTACT CTCCCTGCTT 660 CCGCCATCCA ATCAGATGTG CATCCACATT TGGACTTTGG AGTGTTTGTG GAAGAGCACC 720 CCATGAGGAA CCAGGAAAGC TGGGTTTAGA CTCTGATTAC AGCCCCTGGT TAACTTGGGG 780 CAAGTCATTC ACCTTTCTGA GTCTCACTTT CCCAATCTGC ATGCCTTCTC TGCAGAAACA 840 CTGTGATGAA AATGAAAGTA AGTTGCATGT TTAAAAACAC TATGTAACTG AAAACAACTA 900 TTGGAATTTA AAAACAAAAC AAGAAGAAAA ACAGCCTGTA CCCAATGCTC AGTTCTCTAT 960 GACCCCTGCC CTCTTGTGAG TCCCGTTTTG GACTTAGAAA TCCTTACTGG ACAGTGCCCT 1020 CCTTAGGACC ACCTTAGGGC CAAGGAACTT AGAAATTCTT ACTGGACAGT GTCCCCCTTA 1080 AGGGGGAACT AGGGAACCCA CCCAGATCAG TGAGGCTGGC CAAAGCCAAG CTGGGTTTGC 1140 CAGATGTGCA GCCCAACCGA GCTAAGCTGC GTGGAAAAAA AAAATGCCAC TGCTTGATTA 1200 TGTAAAATCC ATCTGGATCC AAAGCAGAAA ATCAAAGTTG GAAGGGCCCT CAGAGACCAC 1260 CTGGTCCAGC CTGCTCCATC TACTGGTGAG AAAACTAGGG TCCAGAGATG GGGAGCAACT 1320 TGCCCAAGGT CACTCAGCAA GTATGCGGCC AAGTCCTCTC TGTCCTTCCC TGCTGCAAAA 1380 CACCAGAACA CCACTCCTGA ACTCCCAAGC TGGCTTCCTG TTAGGCCCTC CCTGATCAGA 1440 ATGTTGGATC TAGTGCTTTG GGGCTGCCTG GGCTCCTGTT CTGTAATGTG AGCAATACAA 1500 ATAAACTCAG TTCAAACATT TACTAGGTCC TTAGTATATG CCAGGTGCTG GGGATGCCAA 1560 TATTAGGGCT TTTTTTTTTT TTAAAGGTGA 1590
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