Tag | Content |
---|
EnhancerAtlas ID | HS059-01554 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:45858750-45861220 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr1:45859196-45859211 | GAGGTCAAGAGATCA | + | 7.23 | Sox6 | MA0515.1 | chr1:45858767-45858777 | AAAACAATGG | - | 6.02 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 45859380 | 45860458 | chr1 | 45860300 | 45860382 | chr1 | 45858800 | 45860994 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I045392 | chr1 | 45858390 | 45860952 |
|
Enhancer Sequence | AATAGGATTC TACTAGAAAA ACAATGGCTA CATTTTAAAA TCATGGGTTT TTCTAGAAGC 60 TGAAAAGACC TGGTTTGGAT GTGACACACC CTTGCTTTTC TTCCTCCCAG GCCCACTATT 120 ATTTTGACCA CACCATCTAC AGAGATGTCA TAGCACATCC AGGCAGGCAC TGGCTTCATA 180 GGAGAGTTTT CTGTCTGCTT TCTTCCCACC CTCTACTCAA ATAACCATAT CACAATCGTG 240 TCACACAACT CTACTTCTAC GTGCAACTTT ACTGCCTAAC CTCTCCCAAA TCATTCCTAA 300 TGGAAAACCA CCACCACATC CAAAGTGGTG TCACAGAGCT GGCAAGCTGA GACATGCATT 360 AGCTTTATAT TGGAAAAAGA GCGGCCGGGC ATAGTGGCTC ATGTCTGTAA TCCCAGCACT 420 TTGGGAGGCC AAGGTGGGAG GATCACGAGG TCAAGAGATC AAGACCATCC TGGCCAACAT 480 GGTGAAACCC CATCTCTACT AAAAATACAA AAATTAGCCA GGCGTGGTGG TGGGCGTCTG 540 TAGTCCCAGC TACTCGGGAG GCTGAGGCAG GAGAATAGCT TGAACCTGGG AGATGGAGGT 600 TGCAGTGAGC TAAGATTGTG CCACTGCACT TCAGCCTGGG TGACAGTGAG ACTCCGTCTC 660 AAAAAAAAAA AAAAAAAGAG CTTGAACAGA GTTAATCACT CTAAATGTTG TAAAAAAACA 720 ATATACTATA AAGAGGAAAT ATTACTCATC CTTGACAGGG AAGTGACATG TGCCTAGAAA 780 AGCACGTAAC ATCAACAATA AGTTTTCACT AAAGTTTTTA TTGCTAACTA TATCAAAAAT 840 CGAAATGAAG CCTCAAATCA TTGTCATGTC ACAAGACCTT AAAAATTTAT ATTCTGAATG 900 ATTTTTATTC CCCTATCCCC ATACCCCACC CCAAATCATA CCAGCTAGAA TTACTTAACT 960 CAGGAAGGGG GTGCTTTCTT AATGCATGTG CTTTGAGAGT AAGTGATTAC TCAACTTTGT 1020 TATTTTTAGT TTCATATGAC ATACAGATTC ATGTTGAGAA GGAGGGTTGC TTTTTTTTTT 1080 GAGACAAGGT CTTGCTCTGT CGCCCAGTCT GGAGTGCGGT GGCACAGTGC AATAGTGTGA 1140 TCATAAGCTC GCTGCAGCCT CAACCTCCCA GTCTCAAGTG ACTCTCCTGT CTCACTGTCT 1200 CAGCCTCCTG AGCAGCTGGG ACTACAGGCA CACACCACAG CTGGCTTTTT TTTTTTTTTT 1260 TTTTTTGGTA GAGACAGGGT CTCACTGTGT TGCCTAGGCT GGTCTCAAGT TCCTGGCCTC 1320 AAGTGATCTT CCTGCCTTGG CTTCCCAAAG TAAGCCACCA CACTAGGCCA AGGATTGCTT 1380 TTGTACTTTA GACCACTGTG GAAACAAACC CATGAAGGAT CTTGTCAAAA TGCAGACTCG 1440 CACTCTGTAG GTCAGGGATG GGGCCTAAGA ATCTGAATTT CTAAACTCCC AGGTGATGCT 1500 GATGTCGCTT GGTCTACAGA CTACATGCAG TGAGTAGCAA AGCCTTTAAA CAAATGACTG 1560 TTTATCACTG CTCTAAAGAT AGTAAGACCA ACAGGAAACT CTTTTTTTTT TTTTTTTTTT 1620 TTTTTTTTTT AAAGACAGAG CCGCACTCTG TTGCCCAGGC TGCAGTACAA TGGCTCAGTC 1680 TTGGTTCACT GCACCTCTGC CTCCTGAGTT CAAGCGATTC TCCTGCCTCA GCCTCCCGAG 1740 TAGCTGGGAT TAGAGGCGGC CACCACACCT GGCTAATTTT TGTATTTTTA GTAGAGACGG 1800 GGTGTTTCAC CATGTTGGCT AGGCTGGTCT CGAACTCCTG ACCTCAAGTG ATCCGCCCGT 1860 CTCAGCCTCC CAAAAGGCTG GGATTACAGG CATTAGCCAC TGCACCCGGC CCCAACAGGA 1920 AACTCTTAAC TCTGATACTA CTGGTAAACT AGACTTTGTC TAGAGACTAG AGTCTTTTCT 1980 ATAGCATGAT TTACCATTCC CCATAAAGTG TCATTATTAA GCTTTTCCAC ATCTTTGCCT 2040 TTTCTCAGAC TGTTCCCACT ACCTAAAATG CCCCTCTCTT CATTTCCACA TACCTTACTT 2100 AACGATGGGG ATACATTCTG AGAAATGCAT TCTTAGGTGA TTTTGTGGTT GCATAATCAT 2160 AGAGTGTACT TACATAAACC TGGATGGTAT AGCCTACAAT ACCCTCAGGC TATACGGTAG 2220 AGTCTATTGA TCCTAGGCTA CAAGCCTGTA CAGCATATTA CTGTACTGAA TACTGTAGAC 2280 AACTGCAACA AAATGGTAAG TTTTGTGTAT CTTAACATAT CTAAACATAG AAAAGGTACA 2340 GTAAAAATAT GGTATTATAA TCTCATGGAA CCACCATCAT GTATGCGGTC TGTTGTTGAC 2400 CAAAACATCT TATGCACTGC ATTACTGTAG TTAGATTCTA CTCATCCTCA AATACCAGTT 2460 CAAATACTTC 2470
|