EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS059-01470

Organism

Homo sapiens

Tissue/cell

GM12878

Coordinate

chr1:43685930-43687040

Target genes

Number: 5
Name	Ensembl ID

WDR65	ENSG00000243710
EBNA1BP2	ENSG00000117395
TMEM125	ENSG00000179178
C1orf210	ENSG00000253313
TIE1	ENSG00000066056

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr1:43685937-43685948	AAAGATAAGAA	-	6.62
IRF1	MA0050.2	chr1:43686474-43686495	AAAAAAAAAAAGAAAGAAAAA	-	6.59
POU6F1	MA0628.1	chr1:43686512-43686522	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr1:43686512-43686522	ATTAATTAAT	-	6.02
Stat6	MA0520.1	chr1:43686666-43686681	CACTTCCTCAGAAGC	+	6.23

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I043220

chr1

43686019

43688016

Enhancer Sequence

AAAGCAAAAA GATAAGAAAA TCAAAGCATA GATGGAGAAT AACTAGCAGA ATACTGATTC 60
CTGGATTGTC AGGAAGTTAA ATAAAATTAG TCTACATGGC CTTTACATAG TTAGATTTGG 120
TCTGGGACTC TCCCAGATTC TTTTCTTTGT TCTACACAAA TCTGGACTCC TATCTAAAAT 180
CCCCACTGGG CAAGGTGGCT CACCCCTATA ATCCTAACAC TTTGGAAGGC CTAGGCAGGA 240
GGATCGCTTG TATCCGAGAG CTTGAGACCA GCATGGGCAA CATAGTGAGA CCCTGTCTCT 300
ATGTAAAATA AAAAATGAGT CTGCCATGGT GGCATCTGCC TGTAGTTCTA GCTACTTGGG 360
AGGCTGGGAT GGGAGGACTG CTCGAGCCTG GGAGGTGGGG ACTGTAGTGA GTCATGATCT 420
CTGCACTGCA CTCCAGCTTG GATGACAGAG CGAGGCCCTG TCCCTCACCC CCTAAAGAAA 480
TCCCCAATTA TGTCCTTGAG GGATATTTGT TTCTTTAATG TCTATGGGTC ATAAAGTTCG 540
GCTAAAAAAA AAAAAGAAAG AAAAACCTTG GCTATTAATT GTATTAATTA ATTCACTTTA 600
TAATTTTATT CATTTAGCCA ACAAACATTT ATTTGGTGCT CTATATAAGC CAGGCGCAAA 660
GTTAGGTCCT GAAGATGGCA CACCACCTCC AACTCGCCCC CCAAGCCTGA AAGCTTTCCT 720
GCTCAGTTAA AGAAAACACT TCCTCAGAAG CTTACCCATG AGCACAGCCA AGGATTTTGT 780
TGACAGCAAT GTGCTGGCAA CAGAGGATTC AAATGAATCC CTACTTTTTC ACCCAGAAGT 840
CCTTTTGACA CGTGTCCAAA ACTGAACTCA TCATTGACAA ACCCATTTAG TAGCAAGAAT 900
AGAAATAGGA ACAGTATAGA GCTTTTAGAG CAGAATATAA CATAAATGAA AAGTGACAAT 960
GTGGTTGCTG CTTCATAGAA CAGTGCTTGG TGCAAAATGA GGGCTTGAGA AATGTTTGTG 1020
AGTGAAGGAG GGTGTTACTT GTAAAATCAG TTCTTGCCCT AGTAGTGCTT TCAGCAGATG 1080
TGTGTAAATG AGGAAATGTG ACTCTGTTTT 1110